Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq18871 118 1e-21 seq47143 113 4e-20 seq87437 98.7 9e-16 >seq18871 Length=4271 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||||||||| || || || || || | || || |||||||||||||| ||||| Sbjct 2025 TCCACCGCGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCAGA 2084 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||| || ||| || || ||||||||||| | || || ||||||||||| || || Sbjct 2085 TAACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGG 2144 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| |||||| |||| | ||| | || || | |||||| Sbjct 2145 AATACCTTCCTTGTCTTGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGGCCTCGAC 2204 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | |||||| || |||| || || || ||||| ||||| Sbjct 2205 TTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 Score = 113 bits (124), Expect = 4e-20 Identities = 162/227 (71%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| || || || || ||||| | || || || || |||||||||||||| Sbjct 2761 CCGCCGCGCAAACGTAATACTAAATGCAAGGTCGA-TCCTTCTGAATATTGTAATCAGAT 2819 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || |||| |||||| ||||| | || || ||||||||||| || || Sbjct 2820 AATGTGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGA 2879 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| |||||| ||| || || | | ||| | ||||| | | ||| ||| Sbjct 2880 ATACCCTCTTTGTCCTGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCCACT 2939 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || || | |||||||||||||||||||| Sbjct 2940 TCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| |||| || | || | ||| | || || ||||| |||||||| ||||| Sbjct 2532 TCCACCTCGTAGCCGTAGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCAGA 2591 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || || ||| || | |||||| |||||| | ||||| || || ||||| || || Sbjct 2592 TAAAGTTCGGCCATCTTCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGTGG 2651 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || || ||| |||||| |||| | ||| ||| | ||| || | || Sbjct 2652 AATACCTTCTTTATCCTGAATTTTC-GCTTTAACGTT-TTCAATGGTATCTGATTGTTCA 2709 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||||| | || | ||||| || || | |||||||||||||| |||||| Sbjct 2710 ACTTCTAACGTTATTGTTTTTCCAGTTAATGTTTTTACAAAAATTTGCATG 2760 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || |||||||| ||||| | ||| || ||||| || ||||||||||| Sbjct 2254 CCACCACGCAAACGCAACACTAAATGCAACGTCGATTCTTTCTGTATATTGTAATCCGAA 2313 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || | ||||| ||||| | || ||||| |||||||| || || Sbjct 2314 AGAGTTCGGCCATCTTCCAATTGTTTACCAGCAAAAATTAATCGTTGCTGATCAGGCGGA 2373 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| ||| ||||| ||||| | ||| | || |||| ||| ||| Sbjct 2374 ATACCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCAATAGTATCCGATGGCTCCACT 2433 Query 127067 TCGACGGTCACCGTTTTGCC 127086 || | || | ||||| || Sbjct 2434 TCAAGTGTAATAGTTTTACC 2453 >seq47143 Length=13737 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||||||||| || || || ||||| | ||| || ||||| |||||||| || || | Sbjct 814 CCACCGCGTAAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTC 873 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | ||| ||||| |||||||| ||| | || || || || ||||| ||||| Sbjct 874 AACGTTCTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGA 933 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| || |||||| || | | ||| | || || | ||||||| Sbjct 934 ATACCTTCCTTATCTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACT 993 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || || | |||||| |||||||| ||||| Sbjct 994 TCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCAT 1040 >seq87437 Length=6430 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||||||||| || || || | ||| | || || || || |||||||| ||||| | Sbjct 525 CCACCGCGTAAGCGTAAAACTAGATGCAATGTCGATTCCTTCTGAATATTATAATCACTT 466 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| ||| || |||| ||||||||||| | || || |||||||| || ||||| Sbjct 465 AACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAGGA 406 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| | | ||| | | || ||| | | ||| | || || | |||||| Sbjct 405 ATTCCTTCCTTAT-CTTGAATCTTTGCCTTAACATTTTCAATTGTATCTGATGACTCGAC 347 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || || | ||||| || ||||||||||| Sbjct 346 CTCAAGCGTAATTGTTTTACCAGTTAACGTTTTCACGAAAATCTGCAT 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474936422156720