Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_011802.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq56214 392 9e-105 >seq56214 Length=539 Score = 392 bits (434), Expect = 9e-105 Identities = 407/532 (77%), Gaps = 1/532 (0%) Strand=Plus/Minus Query 40943 TCATATCGCGCTGGGGAGAGTGGTGTTAAAACTTGGCAAGGTACTGTGGGCTCGACAACC 41002 ||||| || || |||||||| || ||||| || ||||| || || || ||||| ||||| Sbjct 531 TCATACCGAGCCGGGGAGAGCGGAGTTAAGACATGGCAGGGAACCGTAGGCTCCACAACA 472 Query 41003 TCTCGCAACTATAATCTGCAATTCCGCGACTCGGTCGTTATTTACCCCGTATGGGACGGA 41062 || || || |||||||| ||||| || || || || ||| | ||||| |||||||| ||| Sbjct 471 TCACGAAATTATAATCTTCAATTTCGTGATTCCGTAGTTTTGTACCCGGTATGGGATGGA 412 Query 41063 TTCGATTTAGGTGCTGACACTGACATGAATCCGGAGTTGGACAGGCCTGGGGACTACCCT 41122 ||||||||||| || || || |||||||||||||| ||| ||||||||||| |||||| Sbjct 411 TTCGATTTAGGCGCAGATACCGACATGAATCCGGAAGCGGATAGGCCTGGGGATTACCCT 352 Query 41123 ATAACCCAATACCCACTGCATCAGTTACCCCTAAATCACCTGATTGATAATCTTCTGGTT 41182 || |||| |||||| | ||| | | || |||| || |||| || ||||| | ||| Sbjct 351 GTATCCCAGTACCCAGTACATATGCTCCCGTTAAACCATTTGATAGACAATCTATTTGTT 292 Query 41183 CGCGGGGCGTTAGGTGTAGGTTTTGGTATGGATGGTAAGGGCATGTATGTGTCTAATATT 41242 | || || | || |||||||| |||||||| || | || ||||||| ||||| || Sbjct 291 AGAGGTTCGCTGGGGGTAGGTTTCGGTATGGACGGGCAAGGTCTGTATGTCTCTAACATA 232 Query 41243 ACCGTAGAAGATTGCGCTGGCTCTGGCGCGTACCTACTCACCCATGAATCAGTATTTACC 41302 ||||| |||||||||||||| ||||| || || | || |||| ||| ||||||| || Sbjct 231 ACCGTCGAAGATTGCGCTGGTTCTGGGGCTTATATTCTTGCCCACGAAACAGTATTCACT 172 Query 41303 AATATAGCCATAATTGACACCAATACTAAGGATTTCCAGGCTAATCAGATTTATATATCT 41362 ||||| || ||||| |||||||||||||| | |||| || || ||||| || || || Sbjct 171 AATATCGCAATAATCGACACCAATACTAAAAACTTCCCTGCGAACCAGATATACATCTCG 112 Query 41363 GGGGCTTGCCGTGTGAACGGTTTACGTTTAATTGGGATCCGCTCAACCGATGGGCAGGGT 41422 ||||| |||||||| ||||| |||| || | || ||||| ||||| | ||||| Sbjct 111 GGGGCATGCCGTGTTAACGGCCTACG-TTGGTCGGCATCCGGTCAACTACCGAACAGGGC 53 Query 41423 CTAACCATAGACGCCCCTAACTCTACCGTAAGCGGTATCACCGGGATGGTAG 41474 || || |||||||| |||||||| || || |||||||| ||||| | |||| Sbjct 52 CTTACGATAGACGCGCCTAACTCCACTGTGAGCGGTATAACCGGCTTCGTAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133938405008758