Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq47143 149 6e-31 seq87437 140 3e-28 seq18871 131 2e-25 >seq47143 Length=13737 Score = 149 bits (164), Expect = 6e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCG 45188 || |||| ||||| ||| ||||| || || |||||||| || | | ||| | ||| Sbjct 829 AAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTTCCATCT 888 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 || | ||||||||| ||| |||| || ||||| || || || ||||| ||||| |||||| Sbjct 889 TCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGAATACCTTCCTTATCT 948 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 |||||||| ||| | ||| | || ||||| | ||||||||| || |||| ||| Sbjct 949 TGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACTTCAAGCGTAATGGTT 1008 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||| |||||| |||||||||||||| Sbjct 1009 TTACCAGTTAAAGTTTTCACAAAAATTTGCAT 1040 >seq87437 Length=6430 Score = 140 bits (154), Expect = 3e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCG 45188 || |||||||||| || |||||||| || ||||||||||| || | ||| | || Sbjct 510 AAAACTAGATGCAATGTCGATTCCTTCTGAATATTATAATCACTTAACGTTCGACCGTCC 451 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 || ||||||||||| || |||| || || |||||||| || ||||| ||||| |||||| Sbjct 450 TCTAATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAGGAATTCCTTCCTTATCT 391 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 ||||| ||| || | ||| | || || || |||||||| || || |||| ||| Sbjct 390 TGAATCTTTGCCTTAACATTTTCAATTGTATCTGATGACTCGACCTCAAGCGTAATTGTT 331 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||| ||||| || ||||| ||||| Sbjct 330 TTACCAGTTAACGTTTTCACGAAAATCTGCAT 299 >seq18871 Length=4271 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45129 AACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCG 45188 || || | |||||| || |||||||||||||| || || ||| | || || Sbjct 3003 AATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCGTCT 3062 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 || |||||||| || || | || |||||||| || || |||||||| |||||||| || Sbjct 3063 TCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTTGTCC 3122 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 || |||||| || | ||| | ||||| || ||||||||||| | ||||| |||| Sbjct 3123 TGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATCGTT 3182 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||| |||||| ||||| |||||||| Sbjct 3183 TTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || |||| | |||||||| || || ||||| || || ||||||||||| Sbjct 2530 ATTCCACCTCGTAGCCGTAGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCA 2589 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| ||||| ||||| || ||| | ||||| ||||| || || || Sbjct 2590 GATAAAGTTCGGCCATCTTCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGT 2649 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||||||||| |||||||| ||| | ||| | ||| || || || Sbjct 2650 GGAATACCTTCTTTATCCTGAATTTTCGCTTTAACGTTTTCAATGGTATCTGATTGTTCA 2709 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | || | ||||| || |||| |||||||||||||||||||| Sbjct 2710 ACTTCTAACGTTATTGTTTTTCCAGTTAATGTTTTTACAAAAATTTGCAT 2759 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169 ||||| ||||| | | || |||| |||| || ||||| ||||| ||||||||||| Sbjct 2023 ATTCCACCGCGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCA 2082 Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 | | ||| || ||| || | ||||||||| || | || || || ||||| || || Sbjct 2083 GATAACG-TTCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGG 2141 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289 |||||| ||||| || ||||||||||| ||||| ||| | || || || | ||| Sbjct 2142 CGGAATACCTTCCTTGTCTTGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGGCCTC 2201 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| | || | |||||| || || | || || || ||||||||||| Sbjct 2202 GACTTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 Score = 105 bits (116), Expect = 6e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 |||||||| ||||| ||| ||||| || || ||||| ||||| | ||| ||| Sbjct 2268 CAACACTAAATGCAACGTCGATTCTTTCTGTATATTGTAATCCGAAAGAGTTCGGCCATC 2327 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 ||||||||||| || || | || ||||||||||| || |||||||| ||||| ||||| Sbjct 2328 TTCCAATTGTTTACCAGCAAAAATTAATCGTTGCTGATCAGGCGGAATACCTTCCTTATC 2387 Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 |||||||| |||| ||| | || || || | ||| ||||| || |||| || Sbjct 2388 CTGAATTTTAGCCTTGACGTTTTCAATAGTATCCGATGGCTCCACTTCAAGTGTAATAGT 2447 Query 45308 TTTGCC 45313 ||| || Sbjct 2448 TTTACC 2453 Score = 93.3 bits (102), Expect = 4e-14 Identities = 164/238 (69%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| | | || |||| ||||| || ||| |||| || ||||| ||||| Sbjct 2758 ATGCCGCCGCGCAAACGTAATACTAAATGCAAGGTCGAT-CCTTCTGAATATTGTAATCA 2816 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | || || || ||||| || || | || || || ||||| || || Sbjct 2817 GATAATGTGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGT 2876 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || ||||| || || || || ||| | ||| | ||||| |||||||| Sbjct 2877 GGAATACCCTCTTTGTCCTGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCC 2936 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 ||||| | || | ||||| || |||| |||||||||||||| |||||| ||| || Sbjct 2937 ACTTCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCATCCCGCCAC 2994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451466711751880