Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq18871 109 1e-18 seq47143 93.3 1e-13 >seq18871 Length=4271 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| || |||||||||| ||||||||| | || || | || ||||| | || Sbjct 3012 TGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCGTCTTCTAATTGT 3071 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || || || | || || || || || |||||||||| ||||| || ||| Sbjct 3072 TTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTTGTCCTGGATTTTT 3131 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| ||| | ||||| | || || || ||||| || ||||| ||||| || Sbjct 3132 GCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATCGTTTTACCAGTT 3191 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | |||||||||||| ||||| Sbjct 3192 AAAGTTTTCACAAATATTTG 3211 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || ||||| || || || || || | || || |||| ||||| | |||||| Sbjct 2548 AGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCAGATAAAGTTCGGCCATCT 2607 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||| || || ||||| || | || || || || || ||| |||||| ||| Sbjct 2608 TCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGTGGAATACCTTCTTTATCC 2667 Query 199538 TGAATCTTTTGCTTCA-CGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||| ||| |||| | || ||| | ||| |||| | ||| || || ||||| || || Sbjct 2668 TGAAT-TTTCGCTTTAACGTTTTCAATGGTATCTGATTGTTCAACTTCTAACGTTATTGT 2726 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||||| ||||||||||| Sbjct 2727 TTTTCCAGTTAATGTTTTTACAAAAATTTG 2756 >seq47143 Length=13737 Score = 93.3 bits (102), Expect = 1e-13 Identities = 145/204 (71%), Gaps = 5/204 (2%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || || || || | || |||||| ||| || ||||||||||| || || |||||| Sbjct 844 GTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTTCCATCTTCTAGTTGTTTTCCG 903 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC-TT 199551 ||||| || | || || || || ||| ||| ||||| || ||||| ||| || || Sbjct 904 GCGAATATTAACCGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGAAT-TTTCGCTTT 962 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 || ||| | || || | || || || || | ||| || || ||||| || | ||| Sbjct 963 AACATTTTCAATCGTATCGGATGGCTCGACTTCAAGCGTAATGGTTTTACCAGTTAAAGT 1022 Query 199612 TTTCACAAAAATTTGGTACATTTT 199635 ||||||||||||||| |||||| Sbjct 1023 TTTCACAAAAATTTG---CATTTT 1043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177487341296851