Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq4536 104 3e-17 seq77437 86.0 7e-12 >seq4536 Length=5155 Score = 104 bits (114), Expect = 3e-17 Identities = 168/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922 ||||||||| ||||||| || || || || ||| | || |||||||| | ||| Sbjct 2486 CTGTCATGTCTTATGATAACTTATCCGTCAACAAACGGAGTATTTGATGAAACAATTGCT 2427 Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982 | || ||| | | || ||| | ||||||| || ||||| | ||||| || ||| | Sbjct 2426 GAAATTTGTGACTTAGTGCATAAGTATGGTGGACAAGTATACGTAGATGGGGCCAATATG 2367 Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042 || || || ||||| | || |||| || ||| || || | ||| |||| Sbjct 2366 AACGCTCAAGTAGGTTTGTGCCGTCCTGGTGATTACGGTAGTGACGTTTCACATTTAAAT 2307 Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102 ||||||||||| || |||||||||||||||||||| ||||| || | || || || || Sbjct 2306 TTACATAAAACCTTTTGTATTCCACATGGAGGTGGGGGTCCAGGAATGGGCCCGATTGGA 2247 Query 155103 GT 155104 || Sbjct 2246 GT 2245 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 155367 GATATAGCAAAGAGACTTATGGACTATGGATTCCATGCACCTACACTATCGTGGCCTGTG 155426 ||||| ||||| ||| | ||||||||||| || ||||| |||||| | |||||||| || Sbjct 1860 GATATTGCAAAAAGATTAATGGACTATGGCTTTCATGCCCCTACAATGTCGTGGCCAGTA 1801 Query 155427 TTAGGAACTATGATGGTAGAACCCACAGAGTCTGAG 155462 || ||| | ||| | ||||| |||||||||||| Sbjct 1800 CCTGGCACTTTAATGATCGAACCAACAGAGTCTGAG 1765 >seq77437 Length=3170 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 153885 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAA 153944 ||| || |||| || ||||||| || || || | |||||||| || || | || ||| Sbjct 2911 GGTCATGAAGCCTATCGATTAGCGCTGCAAACACGTGAGCAGCACATTAGACGCGATAAA 2852 Query 153945 GCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCA 154004 || || ||||| ||||||||||| || || || || || || ||| | | | | ||||| Sbjct 2851 GCTACAAGTAATATCTGCACAGCGCAAGCTCTACTTGCCAACATGGCAGCAATGTATGCC 2792 Query 154005 GCATATCATGGTGCAGATGG 154024 | ||||||||| |||| || Sbjct 2791 GTCTATCATGGTCCAGAAGG 2772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578525325087520