Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4536 116 4e-21 seq77437 91.5 2e-13 >seq4536 Length=5155 Score = 116 bits (128), Expect = 4e-21 Identities = 171/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 ||||||||| ||||||| || ||||| || ||| | || |||||||| || || Sbjct 2486 CTGTCATGTCTTATGATAACTTATCCGTCAACAAACGGAGTATTTGATGAAACAATTGCT 2427 Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 | || ||| | | || ||| || ||||||| || ||||| | ||||| || ||| | Sbjct 2426 GAAATTTGTGACTTAGTGCATAAGTATGGTGGACAAGTATACGTAGATGGGGCCAATATG 2367 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 || || || |||||| | || |||| || ||| || || | ||| |||| Sbjct 2366 AACGCTCAAGTAGGTTTGTGCCGTCCTGGTGATTACGGTAGTGACGTTTCACATTTAAAT 2307 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777 |||||||| || || |||||||||||||||||||| ||||| || | || || ||||| Sbjct 2306 TTACATAAAACCTTTTGTATTCCACATGGAGGTGGGGGTCCAGGAATGGGCCCGATTGGA 2247 Query 159778 GT 159779 || Sbjct 2246 GT 2245 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 160042 GATATAGCAAAGAGACTTATGGACTATGGATTCCATGCACCTACACTATCGTGGCCTGTG 160101 ||||| ||||| ||| | ||||||||||| || ||||| |||||| | |||||||| || Sbjct 1860 GATATTGCAAAAAGATTAATGGACTATGGCTTTCATGCCCCTACAATGTCGTGGCCAGTA 1801 Query 160102 TTAGGAACTATGATGGTAGAACCAACAGAGTCTGAG 160137 || ||| | ||| | |||||||||||||||||| Sbjct 1800 CCTGGCACTTTAATGATCGAACCAACAGAGTCTGAG 1765 >seq77437 Length=3170 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 158560 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619 ||| || |||| || ||||||| || || || | |||||||| || ||| | || ||| Sbjct 2911 GGTCATGAAGCCTATCGATTAGCGCTGCAAACACGTGAGCAGCACATTAGACGCGATAAA 2852 Query 158620 GCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCA 158679 || || ||||| ||||||||||| ||||| || || || || ||| | | | ||||| Sbjct 2851 GCTACAAGTAATATCTGCACAGCGCAAGCTCTACTTGCCAACATGGCAGCAATGTATGCC 2792 Query 158680 GCATATCATGGTGCAGATGG 158699 | ||||||||| |||| || Sbjct 2791 GTCTATCATGGTCCAGAAGG 2772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587353234680080