Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq5310 127 2e-24 >seq5310 Length=1504 Score = 127 bits (140), Expect = 2e-24 Identities = 239/350 (68%), Gaps = 1/350 (0%) Strand=Plus/Plus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || ||||| | |||||| || ||||| | ||| | |||||| ||| | || Sbjct 436 CACGCAAACTGACAATGGTAACCTTCGTCACGCGATATAAGTTCATTGCTAAAAGACAAG 495 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 |||||||| | | || |||||| | ||||||||||| ||||| ||| || ||||| Sbjct 496 CCAGGCATTAAGCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAA 555 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140 || ||||| || || |||||||||| || | ||| || | | |||| | ||| | Sbjct 556 ATGCCTTCGACAGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAA 615 Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTA 19200 |||||||| | |||||||| || |||||||| |||||||| || || || | ||| Sbjct 616 ATCCATTTTAAGGCCCAATCGGCTTTCTTTTTAACACATGGAATCGTAGTGATTGCATTG 675 Query 19201 AATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATT 19260 || || | ||| || |||| || | | | | | || || | || ||||||| Sbjct 676 AAAAGGAAATCACGTTCTTCTGGATTCGTGATTAACGACTGGATTAAAATACCGTACATT 735 Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCC-GTAAAAACATCTTG 19309 || | |||||| |||||| ||||||||||| | || || || ||| Sbjct 736 TCCGCATGAATCGATTCTATTTGAATCTGAAATCCTGAAATAAAATTTTG 785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561441626038920