Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq18871 122 7e-23 seq87437 96.9 3e-15 >seq18871 Length=4271 Score = 122 bits (134), Expect = 7e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||||||||||||||||| | ||| |||| || ||||| || || ||||| Sbjct 2796 TCCTTCTGAATATTGTAATCAGATAATGTGCGACCGTCCTCTAACTGTTTGCCAGCAAAA 2855 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || | ||||| ||||| | |||| ||||| ||||| ||||| ||| ||| Sbjct 2856 ATTAACCGCTGCTGATCTGGTGGAATACCCTCTTTGTCCTGGATCTTGGCTTTAACATTT 2915 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| | |||||| |||| || || |||||||| || || ||||||||| Sbjct 2916 TCAATTGTGTCTGAAGACTCCACTTCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACA 2975 Query 48756 AAAATCTGCATC 48767 |||||||||||| Sbjct 2976 AAAATCTGCATC 2987 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 |||||||||||||| |||||||||| |||| | || || | || || || ||||| Sbjct 2062 TCTTTTTGAATATTATAATCAGATAACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAA 2121 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || | ||||| ||||| | |||| || |||||||| ||| || ||| ||| Sbjct 2122 ATTAAACGCTGCTGATCTGGCGGAATACCTTCCTTGTCTTGAATTTTCGCTTTGACATTT 2181 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| ||||| || |||| ||| ||||||||||||||||| || || || Sbjct 2182 TCAATTGTATCTGAGGCCTCGACTTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACG 2241 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 2242 AAAATTTGCAT 2252 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | |||||| | || | ||| || ||| ||||| |||||||| ||||||||| Sbjct 2533 CCACCTCGTAGCCGTAGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCAGAT 2592 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | |||| | || |||||||| ||||| || || |||| || |||||||| | ||| Sbjct 2593 AAAGTTCGGCCATCTTCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGTGGA 2652 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || ||| || ||| || | | | ||||| || || Sbjct 2653 ATACCTTCTTTATCCTGAATTTTCGCTTTAACGTTTTCAATGGTATCTGATTGTTCAACT 2712 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||| || |||||||| || || |||||||||||||| ||||| Sbjct 2713 TCTAACGTTATTGTTTTTCCAGTTAATGTTTTTACAAAAATTTGCAT 2759 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || || |||||||| || || || ||||| || ||||| || ||| Sbjct 2988 CCGCCACGTAAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAT 3047 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | || |||| || || || || || ||||| || | ||| |||||||| | ||| Sbjct 3048 AACGTACGGCCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGA 3107 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || ||||| || ||| || || | | | || || | ||| || Sbjct 3108 ATTCCTTCTTTGTCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACT 3167 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||||||||| || || |||||||| ||||| || ||||| Sbjct 3168 TCCAAAGTAATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 >seq87437 Length=6430 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || |||||||| |||||| || ||||| |||| || || || || || |||||| Sbjct 489 TCCTTCTGAATATTATAATCACTTAACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAAT 430 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || | ||||| || || | |||| || ||||| || ||||||| || ||| Sbjct 429 ATTAAGCGCTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGAATCTTTGCCTTAACATTT 370 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | ||||| | ||| ||||| | |||||| ||||| || || || ||||| || Sbjct 369 TCAATTGTATCTGATGACTCGACCTCAAGCGTAATTGTTTTACCAGTTAACGTTTTCACG 310 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 309 AAAATCTGCAT 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380496763890819