Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_019539.1 Length=42391 Score E Sequences producing significant alignments: (Bits) Value seq56214 655 0.0 >seq56214 Length=539 Score = 655 bits (726), Expect = 0.0 Identities = 466/533 (87%), Gaps = 1/533 (0%) Strand=Plus/Minus Query 24037 CTCATACCGTGCAGGGGAAAGCGGTGTTAAGACGTGGCAAGGCACGGTAGGTTCTACGAC 24096 ||||||||| || ||||| ||||| |||||||| ||||| || || ||||| || || || Sbjct 532 CTCATACCGAGCCGGGGAGAGCGGAGTTAAGACATGGCAGGGAACCGTAGGCTCCACAAC 473 Query 24097 CTCTCGTAACTACAACCTGCAATTCCGGGATTCGGCGGTGCTATACCCTGTATGGGACGG 24156 || || || || || || ||||| || ||||| | || | ||||| |||||||| || Sbjct 472 ATCACGAAATTATAATCTTCAATTTCGTGATTCCGTAGTTTTGTACCCGGTATGGGATGG 413 Query 24157 CTTCGATTTAGGCGCAGATACCGACATGAACCCAGAAGATGACCGCCCGGGGGATTTCCC 24216 ||||||||||||||||||||||||||||| || |||| || | || ||||||| ||| Sbjct 412 ATTCGATTTAGGCGCAGATACCGACATGAATCCGGAAGCGGATAGGCCTGGGGATTACCC 353 Query 24217 CATTTCTCAGTACCCGGTACATATGCTCCCGTTAAACCATTTGATAGACAATCTATTTGT 24276 | || |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 352 TGTATCCCAGTACCCAGTACATATGCTCCCGTTAAACCATTTGATAGACAATCTATTTGT 293 Query 24277 TAGAGGTTCGCTGGGGGTAGGTTTCGGTATGGACGGGCAAGGTCTGTATGTCTCTAACAT 24336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 292 TAGAGGTTCGCTGGGGGTAGGTTTCGGTATGGACGGGCAAGGTCTGTATGTCTCTAACAT 233 Query 24337 AACCGTCGAGGATTGCGCCGGTTCTGGGGCTTATATTCTGGCCCATGAAACAGTATTCAC 24396 ||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||| Sbjct 232 AACCGTCGAAGATTGCGCTGGTTCTGGGGCTTATATTCTTGCCCACGAAACAGTATTCAC 173 Query 24397 TAATATCGCTATAATTGACACCAATACCAAAAATTTCCCCGCGAACCAGATATACATCTC 24456 ||||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct 172 TAATATCGCAATAATCGACACCAATACTAAAAACTTCCCTGCGAACCAGATATACATCTC 113 Query 24457 GGGGGCATGCCGTGTGAACGGTTTACGTTTGGTCGGCATCCGTTCAACTACCGAACAGGG 24516 ||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||||| Sbjct 112 GGGGGCATGCCGTGTTAACGGCCTACG-TTGGTCGGCATCCGGTCAACTACCGAACAGGG 54 Query 24517 TATGACGATAGACGCACCTAACTCTACTGTAAGTGGTATCACCGGTTTAGTAG 24569 | ||||||||||| |||||||| ||||| || ||||| ||||| || |||| Sbjct 53 CCTTACGATAGACGCGCCTAACTCCACTGTGAGCGGTATAACCGGCTTCGTAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135376781312458