Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4536 107 2e-18 seq77437 98.7 1e-15 >seq4536 Length=5155 Score = 107 bits (118), Expect = 2e-18 Identities = 169/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| || || | || ||||| |||||||||||||||||||| || || |||||| Sbjct 2245 ACTCCAATCGGGCCCATTCCTGGACCCCCACCTCCATGTGGAATACAAAAGGTTTTATGT 2304 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||||| ||| | || || ||| || |||| || | |||||| || || Sbjct 2305 AAATTTAAATGTGAAACGTCACTACCGTAATCACCAGGACGGCACAAACCTACTTGAGCG 2364 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || ||||| | ||||| || ||||||| | ||| || | | ||| || Sbjct 2365 TTCATATTGGCCCCATCTACGTATACTTGTCCACCATACTTATGCACTAAGTCACAAATT 2424 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 | || || |||||||| || | || || ||||| || ||||||| |||||| Sbjct 2425 TCAGCAATTGTTTCATCAAATACTCCGTTTGTTGACGGATAAGTTATCATAAGACATGAC 2484 Query 138423 AG 138424 || Sbjct 2485 AG 2486 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 137825 CTCAGACTCTGTGGGTTCTACCATCATAGTTCCTAACACAGGCCACGATAGTGTAGGTGC 137884 |||||||||||| ||||| | ||| | ||| || || |||||||| | |||||| || Sbjct 1765 CTCAGACTCTGTTGGTTCGATCATTAAAGTGCCAGGTACTGGCCACGACATTGTAGGGGC 1824 Query 137885 ATGAAATCCATAGTCCATAAGTCTCTTTGCTATATC 137920 |||||| ||||||||||| | ||| ||||| ||||| Sbjct 1825 ATGAAAGCCATAGTCCATTAATCTTTTTGCAATATC 1860 >seq77437 Length=3170 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 || |||| ||||||||| | ||||| | | | | ||| || || || || ||||| ||| Sbjct 2772 CCTTCTGGACCATGATAGACGGCATACATTGCTGCCATGTTGGCAAGTAGAGCTTGCGCT 2831 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 |||||||| ||||| || ||||| || | |||||| |||||||| | ||||| || ||| Sbjct 2832 GTGCAGATATTACTTGTAGCTTTATCGCGTCTAATGTGCTGCTCACGTGTTTGCAGCGCT 2891 Query 139383 AATC 139386 |||| Sbjct 2892 AATC 2895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578311179561560