Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq18871 167 3e-36 >seq18871 Length=4271 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | |||||||| ||||||||||| || || |||||||| ||| | || Sbjct 2759 ATGCAAATTTTTGTAAAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGAACAATCA 2700 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| |||||| ||| ||||| || ||||||||||| || || ||||| ||| Sbjct 2699 GATACCATTGAAAACGTTAAAGCGAAAATTCAGGATAAAGAAGGTATTCCACCAGATCAA 2640 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | ||||||| || ||||| ||| | |||||| | |||||||||| ||||||||| Sbjct 2639 CAACGGTTGATTTTCGCTGGTAAACAGTTGGAAGATGGCCGAACTTTATCTGATTATAAT 2580 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || ||||| | || || ||| |||| || | || |||| || Sbjct 2579 ATTCAGAAAGAATCCACCCTCCATCTAGTTCTACGGCTACGAGGTGG 2533 Score = 123 bits (136), Expect = 4e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | ||||| || ||||| ||||| ||||| || |||||||| ||| Sbjct 3214 ATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTCATCT 3155 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||| || ||||| || || |||||||| || || ||||| ||| Sbjct 3154 GACACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGATCAA 3095 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| |||| |||| ||| || || || | ||||| | | || ||||| || || | Sbjct 3094 CAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTATCCGACTACA-- 3037 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 | ||||||| || | || || ||||| || ||| | ||| | ||||| Sbjct 3036 ACATCCAAAAGGAATCTACTCTGCATTTGGTATTACGTTTACGTGGCGG 2988 Score = 122 bits (134), Expect = 1e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 155850 GGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAA 155909 || |||||||||||| | ||||| || || |||| |||| |||||| || |||| Sbjct 2453 GGTAAAACTATTACACTTGAAGTGGAGCCATCGGATACTATTGAAAACGTCAAGGCTAAA 2394 Query 155910 ATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAG 155969 || || ||||| ||||| || || || || || ||| |||| |||| ||| ||||| || Sbjct 2393 ATTCAGGATAAGGAAGGTATTCCGCCTGATCAGCAACGATTAATTTTTGCTGGTAAACAA 2334 Query 155970 CTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTA 156029 | |||||| | ||||| | || ||||| |||||| ||||| ||||| | |||||| Sbjct 2333 TTGGAAGATGGCCGAACTCTTTCGGATTACAATATACAGAAAGAATCGACGTTGCATTTA 2274 Query 156030 GTGTT 156034 ||||| Sbjct 2273 GTGTT 2269 Score = 118 bits (130), Expect = 2e-21 Identities = 171/240 (71%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || ||||| |||||||| || || || |||||||| | || Sbjct 2252 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAAACGATAACGTTGGAAGTCGAGGCCTCA 2193 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||| || ||| ||||| ||||| || ||||| || || ||||| || Sbjct 2192 GATACAATTGAAAATGTCAAAGCGAAAATTCAAGACAAGGAAGGTATTCCGCCAGATCAG 2133 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | || |||| ||| || || || || || ||| | |||| ||||| ||||||||| Sbjct 2132 CAGCGTTTAATTTTTGCTGGAAAACAACTTGAGGATGGCCGAACGTTATCTGATTATAAT 2073 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGT-AAAATTGAA 156061 || ||||| | || | || ||||| ||| | ||| | || || | |||||||| Sbjct 2072 ATTCAAAAAGAATCCACTTTGCACTTAGTTTTACGCTTACGCGGTGGAATCTAAATTGAA 2013 Score = 100 bits (110), Expect = 4e-16 Identities = 159/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| || |||||||||||||| ||||| ||||| || ||| Sbjct 2986 ATGCAGATTTTTGTAAAAACGTTAACTGGAAAAACTATAACATTGGAAGTGGAGTCTTCA 2927 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||| || ||| || || || || ||||| || || || ||||| || Sbjct 2926 GACACAATTGAAAATGTTAAAGCCAAGATCCAGGACAAAGAGGGTATTCCACCAGATCAG 2867 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | || |||| ||| || || ||| | || || | || ||||| ||||| ||| Sbjct 2866 CAGCGGTTAATTTTTGCTGGCAAACAGTTAGAGGACGGTCGCACATTATCTGATTACAAT 2807 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || ||| |||| | |||||||| ||| | || | ||||| Sbjct 2806 AT-TCAGAAGGATCGACCTTGCATTTAGTATTACGTTTGCGCGGCGG 2761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731003331974800