Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq18871 158 2e-33 seq87437 150 4e-31 seq47143 149 1e-30 >seq18871 Length=4271 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||||| || |||| |||| ||| | || | ||||| |||||||||||| Sbjct 2530 ATTCCACCTCGTAGCCGTAGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCA 2589 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| ||||| |||| ||||| ||||||||||| || || || | |||||||| ||| Sbjct 2590 GATAAAGTTCGGCCATCTTCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGT 2649 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||||||||| || ||||| ||| || || || | |||||| ||| Sbjct 2650 GGAATACCTTCTTTATCCTGAATTTTCGCTTTAACGTTTTCAATGGTATCTGATTGTTCA 2709 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| || || ||||| |||||||||||||| | ||| || ||||| Sbjct 2710 ACTTCTAACGTTATTGTTTTTCCAGTTAATGTTTTTACAAAAATTTGCAT 2759 Score = 149 bits (164), Expect = 1e-30 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 192321 ACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTC 192380 ||||||||| ||||| | ||||| || || ||| || || || ||||| || || | Sbjct 2999 ACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCC 3058 Query 192381 ATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTT 192440 || || |||||||| |||||||| ||||||| |||||||| || || ||||||||||| Sbjct 3059 GTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTT 3118 Query 192441 ATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAAT 192500 || || ||||| || || || || | || || || || ||||| | |||||| Sbjct 3119 GTCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAAT 3178 Query 192501 GGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 |||||||||||||| ||||| | |||||| |||||| Sbjct 3179 CGTTTTACCAGTTAAAGTTTTCACAAATATTTGCATT 3215 Score = 143 bits (158), Expect = 5e-29 Identities = 162/216 (75%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 192321 ACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTC 192380 ||||||||||||||| || || | ||| || ||||| |||||||||||||| || | Sbjct 2772 ACGTAATACTAAATGCAAGGTCGATCCTTCTGA-ATATTGTAATCAGATAATGTGCGACC 2830 Query 192381 ATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTT 192440 || || || ||||| |||||||| ||||| | ||| ||||| ||||| || || ||||| Sbjct 2831 GTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGAATACCCTCTTT 2890 Query 192441 ATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAAT 192500 || || || || ||| ||||| || | ||||| || || ||||| | || || Sbjct 2891 GTCCTGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCCACTTCCAATGTTAT 2950 Query 192501 GGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| |||||||| ||||| | ||| |||||||| Sbjct 2951 AGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 136 bits (150), Expect = 8e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | ||| || |||||||| || || | ||||| ||||| ||||| Sbjct 2251 ATACCACCACGCAAACGCAACACTAAATGCAACGTCGATTCTTTCTGTATATTGTAATCC 2310 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| |||| |||||||||||||||||||| ||||||| || |||||||| Sbjct 2311 GAAAGAGTTCGGCCATCTTCCAATTGTTTACCAGCAAAAATTAATCGTTGCTGATCAGGC 2370 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || |||||| || || || |||| ||| || | || Sbjct 2371 GGAATACCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCAATAGTATCCGATGGCTCC 2430 Query 192487 ACTTCTAGAGTAATGGTTTTACC 192509 ||||| || ||||| |||||||| Sbjct 2431 ACTTCAAGTGTAATAGTTTTACC 2453 Score = 134 bits (148), Expect = 3e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTC-TAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATC 192365 || ||||| | |||| ||||| ||||| || ||||| | ||||| ||||||||||| Sbjct 2023 ATTCCACCGCGTAAG-CGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATC 2081 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 |||||| ||||| |||| || | |||||| |||||||| ||||| | ||| ||||| || Sbjct 2082 AGATAACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGG 2141 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || ||||| || ||||| ||||| ||| ||||| || | |||||| | || Sbjct 2142 CGGAATACCTTCCTTGTCTTGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGGCCTC 2201 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || ||||| || || || || || | || || ||||| Sbjct 2202 GACTTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 >seq87437 Length=6430 Score = 150 bits (166), Expect = 4e-31 Identities = 182/245 (74%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 192296 TTAGTTTAATAATACCACCTC-TAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAG 192354 || ||| ||| | ||||| | |||| ||||| |||| ||| || || | || || Sbjct 539 TTGGTTCAATGACGCCACCGCGTAAG-CGTAAAACTAGATGCAATGTCGATTCCTTCTGA 481 Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 |||||||||||| ||| ||||| | || || |||||||| |||||||| ||||| | | Sbjct 480 ATATTATAATCACTTAACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAATATTAAGCGC 421 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || || || || |||||||| |||||||| || || || ||||| || | | Sbjct 420 TGCTGGTCTGGAGGAATTCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCAATTGTA 361 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| || || || || || ||||| |||||||||||||| ||||| | || |||||| Sbjct 360 TCTGATGACTCGACCTCAAGCGTAATTGTTTTACCAGTTAACGTTTTCACGAAAATCTGC 301 Query 192535 ATTTT 192539 ||||| Sbjct 300 ATTTT 296 >seq47143 Length=13737 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | | |||||| |||||||| || || | ||||| |||||||| ||| Sbjct 814 CCACCGCGTAAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTC 873 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || |||| | |||| || | |||||| || || || ||||| | |||||||| || || Sbjct 874 AACGTTCTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGA 933 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || ||||| |||||||| ||||| ||| ||||| || | ||| || | || ||| Sbjct 934 ATACCTTCCTTATCTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACT 993 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || |||||||||||||||||||| ||||| | ||| || |||||||| Sbjct 994 TCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATTTT 1043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983282296091550