Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq87437 161 2e-34 seq18871 154 3e-32 seq47143 132 9e-26 >seq87437 Length=6430 Score = 161 bits (178), Expect = 2e-34 Identities = 176/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171843 CCACCTC-TAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||| | |||| ||||| |||| ||| || || | || || |||||||||||| Sbjct 525 CCACCGCGTAAG-CGTAAAACTAGATGCAATGTCGATTCCTTCTGAATATTATAATCACT 467 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||| | ||| |||| || |||||||| |||||||| ||||| | ||| ||||| || || Sbjct 466 TAACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAGG 407 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 |||||||| |||||||| || || || ||||| || |||||||| || || || Sbjct 406 AATTCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCAATTGTATCTGATGACTCGAC 347 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || ||||| |||||||||||||| ||||| | ||| ||||||||||| Sbjct 346 CTCAAGCGTAATTGTTTTACCAGTTAACGTTTTCACGAAAATCTGCATTTT 296 >seq18871 Length=4271 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||| || |||| |||| ||| | || | ||||| |||||||||||| Sbjct 2530 ATTCCACCTCGTAGCCGTAGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCA 2589 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| ||| | || ||||| ||||||||||| ||||| || | ||||| || ||| Sbjct 2590 GATAAAGTTCGGCCATCTTCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGT 2649 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || ||||| ||| || || || |||||||| ||| Sbjct 2650 GGAATACCTTCTTTATCCTGAATTTTCGCTTTAACGTTTTCAATGGTATCTGATTGTTCA 2709 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| || || ||||| |||||||||||||| | || || ||||| Sbjct 2710 ACTTCTAACGTTATTGTTTTTCCAGTTAATGTTTTTACAAAAATTTGCAT 2759 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 171855 CGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG 171914 |||||||| ||||| | ||||| || || || || || || ||||| | || || Sbjct 3000 CGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCG 3059 Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || |||||||| |||||||||||||||| ||||| || || || ||||||||||| Sbjct 3060 TCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTTG 3119 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || ||||| || || || || || || || || || ||||| | |||||| Sbjct 3120 TCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATC 3179 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 |||||||||||||| ||||| | ||||| |||||| Sbjct 3180 GTTTTACCAGTTAAAGTTTTCACAAATATTTGCATT 3215 Score = 134 bits (148), Expect = 2e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 171840 ATACCACCTC-TAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATC 171898 || ||||| | |||| ||||| ||||| || ||||| | ||||| |||||||||||| Sbjct 2023 ATTCCACCGCGTAAG-CGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATC 2081 Query 171899 TGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 ||||| | ||| | || || | |||||| |||||||||||||| | ||| || || || Sbjct 2082 AGATAACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGG 2141 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 || || ||||| || ||||| ||||| ||| ||||| || |||||||| | || Sbjct 2142 CGGAATACCTTCCTTGTCTTGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGGCCTC 2201 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || || ||||| || || || || || | ||| || ||||| Sbjct 2202 GACTTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 Score = 132 bits (146), Expect = 9e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | | || || |||||||| || || | ||||| ||||| ||||| Sbjct 2251 ATACCACCACGCAAACGCAACACTAAATGCAACGTCGATTCTTTCTGTATATTGTAATCC 2310 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || ||| | || |||||||||||||||||||||||||||| || || ||||| Sbjct 2311 GAAAGAGTTCGGCCATCTTCCAATTGTTTACCAGCAAAAATTAATCGTTGCTGATCAGGC 2370 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| ||||| || |||||| || || || |||||||| || | || Sbjct 2371 GGAATACCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCAATAGTATCCGATGGCTCC 2430 Query 172020 ACTTCTAGAGTAATGGTTTTACC 172042 ||||| || ||||| |||||||| Sbjct 2431 ACTTCAAGTGTAATAGTTTTACC 2453 Score = 132 bits (146), Expect = 9e-26 Identities = 159/215 (74%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 171855 CGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG 171914 |||||||||||||| || || | ||| ||| |||| ||||| ||||| | || || Sbjct 2773 CGTAATACTAAATGCAAGGTCGATCCTTCTGAA-TATTGTAATCAGATAATGTGCGACCG 2831 Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || || ||||| |||||||||||||| | ||| || || ||||| || || ||||| Sbjct 2832 TCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGAATACCCTCTTTG 2891 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || || || ||| ||||| || || ||||| || || ||||| | || || Sbjct 2892 TCCTGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCCACTTCCAATGTTATA 2951 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| ||||| | || |||||||| Sbjct 2952 GTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 >seq47143 Length=13737 Score = 132 bits (146), Expect = 9e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 171855 CGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG 171914 ||||| |||||||| || || | ||||| ||||||||| || || | || | | Sbjct 826 CGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTTCCA 885 Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || | |||||| || || || ||||| | ||||| || || || || ||||| ||| Sbjct 886 TCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGAATACCTTCCTTA 945 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| ||||| ||| ||||| || ||||| || | || ||||| || |||||| Sbjct 946 TCTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACTTCAAGCGTAATG 1005 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 |||||||||||||| ||||| | || || |||||||| Sbjct 1006 GTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATTTT 1043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904061682767400