Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq47013 89.7 2e-12 seq67124 87.8 5e-12 seq17155 87.8 5e-12 >seq47013 Length=4895 Score = 89.7 bits (98), Expect = 2e-12 Identities = 130/180 (72%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 233271 TAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCAT 233330 ||||||| | | |||||| ||| || ||||||||||| || | ||||| ||| |||||| Sbjct 751 TAGCACCATAACCAATCAAACAGTCCCGTTCCATTTCGCCCAAACGCAAACCGCCATCAC 692 Query 233331 TTGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAAT 233390 || || | | | ||| | |||| || | ||| |||||| ||||||| || Sbjct 691 GACTCCGCCCTTCGGTAGGTTGTCTTGTTAGCACCGCTCTCGGACCCCTAGCACGAGCAT 632 Query 233391 TAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATA-ACACGGACC--AATAAATA 233447 ||||||||| | |||||||| |||| | || ||| || ||| ||||| |||||||| Sbjct 631 GAATTTTATCCTGTACCATATGTTTCAATTTCTGATAGTAGACA-GGACCCGAATAAATA 573 >seq67124 Length=7542 Score = 87.8 bits (96), Expect = 5e-12 Identities = 199/296 (67%), Gaps = 4/296 (1%) Strand=Plus/Minus Query 302574 TTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGT 302633 ||||||| || || ||||| || |||||||| ||||| || || || ||||| || Sbjct 2326 TTCCATAGCTTTTATCAAACGTCGTTGAATATAGCCAGTCTCAGCGGTCTTGACAGCGGT 2267 Query 302634 ATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGC 302691 |||||| | ||| ||||||||||||| ||||| || | | |||| ||| ||| ||| Sbjct 2266 ATCAATCAAACCTTCACGACCACCCATTGCATGAAAATAAAACTCTGACGG-CGTCAAGC 2208 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 | || | | | || | || || ||||| || | || || || || ||| | Sbjct 2207 CTGCC-AGATATGAATTTTCTACAAAACCTCGTGATTCAGGACCATAATCATCTTTGATG 2149 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 || || |||| || | ||| | || |||| || || || || |||||||| ||| Sbjct 2148 AAATGCGGCAATGTTCGTTTCCGGAATCCAAATGGAATCCGTTTGCCTTCAACGTTTTGC 2089 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAGC 302867 || || | || | ||| | || |||||||| | || || || |||||||| Sbjct 2088 TGACCAACACAAGCAATGACTTGTGAAATATTAATATTCGAACCTTTAGAGCCAGC 2033 >seq17155 Length=14386 Score = 87.8 bits (96), Expect = 5e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 289016 CGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTT 289075 |||| ||||| || || |||||||||||||||||||| | | || || | || || Sbjct 8822 CGCTTCTTTTACGTCCCACTGCATCAATTTCGTCAATGAATAAAATGCAGGGCGCATGTT 8763 Query 289076 GTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTA 289135 || || || | ||| | |||| || || |||| ||| | ||| || ||||||| | Sbjct 8762 TTCGTGCCATCGAAAACATATCTCGGACTCGCGATGGTCCCACACCGACGAACATTTCCA 8703 Query 289136 CAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCG 289195 ||||||||| | || ||| || || | |||||||||||| || || ||| | | Sbjct 8702 AGAATTCAGAACCTGAAACTGATATAAAAGGTACATTTGCTTCACCAGCCGTTGCTTTGG 8643 Query 289196 CCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 | | | || || || || |||||||| || Sbjct 8642 CTAATAAAGTTTTCCCAGTACCAGGTGGACC 8612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470027008325161