Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq47143 143 2e-29 seq87437 132 4e-26 seq18871 129 5e-25 seq41170 91.5 1e-13 >seq47143 Length=13737 Score = 143 bits (158), Expect = 2e-29 Identities = 179/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 ||||| || ||| | ||||| |||| |||||||| |||||||| ||||| || |||| | Sbjct 1040 ATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCGA-GCCATC 982 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| || | |||| || ||| || || ||||| || ||||| || ||||| ||||| Sbjct 981 CGATACGATTGAAAATGTTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGATCA 922 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| || || || ||||| ||||| || || ||| |||| || || ||||| Sbjct 921 ACAACGGTTAATATTCGCCGGAAAACAACTAGAAGATGGAAGAACGTTGAATGACTATAA 862 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942 ||||| || ||||| || | || || || || || || ||||| |||| | |||||| Sbjct 861 TATTCAGAAAGAATCCACGTTGCATTTAGTCTTACGTTTACGCGGTGGCGTCATTGAGCC 802 Query 24943 AAC 24945 ||| Sbjct 801 AAC 799 >seq87437 Length=6430 Score = 132 bits (146), Expect = 4e-26 Identities = 177/244 (73%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | |||||| |||| |||||||| |||||||| || || || | | Sbjct 299 ATGCAGATTTTCGTGAAAACGTTAACTGGTAAAACAATTACGCTTGAGGTCGAGTCATCA 358 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || || |||||| ||||| || |||||||| ||||| || || Sbjct 359 GATACAATTGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCTCCAGACCAG 418 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || || || || ||||| || ||||| | ||||| |||| | || ||||||| Sbjct 419 CAGCGCTTAATATTTGCTGGAAAACAATTAGAGGACGGTCGAACGTTAAGT--GATTATA 476 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGC 24941 | ||||| |||||||||||| | || | || || || || ||||| |||| | ||| | Sbjct 477 ATATTCAGAAGGAATCGACATTGCATCTAGTTTTACGCTTACGCGGTGGCGTCATTGAAC 536 Query 24942 CAAC 24945 |||| Sbjct 537 CAAC 540 >seq18871 Length=4271 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| |||| |||||||| ||||| | ||||| || | | Sbjct 3214 ATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTCATCT 3155 Query 24764 GACACAGTAGAAA-CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || ||| ||||| ||||| |||||||||||||| || || ||||| Sbjct 3154 GACACAATTGAAAACGTTAAGGCAAAA-ATCCAGGACAAAGAAGGAATTCCGCCAGATCA 3096 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| || || ||||| || ||||| | || || | | | || || || || Sbjct 3095 ACAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTATCCGACTACAA 3036 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||||||||| || || || ||||| || || || || || || Sbjct 3035 CATCCAAAAGGAATCTACTCTGCATTTGGTATTACGTTTACGTGGCGG 2988 Score = 109 bits (120), Expect = 5e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| |||| || ||||| || ||| | ||||| ||| | Sbjct 2759 ATGCAAATTTTTGTAAAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGAACAATCA 2700 Query 24764 GACACAGTAGAAA-CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| || |||| | ||| || || || |||||||| || || || ||||| Sbjct 2699 GATACCATTGAAAACGTTAAAGCGAAA-ATTCAGGATAAAGAAGGTATTCCACCAGATCA 2641 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| ||||| || || || |||||| |||| ||| ||| | || |||||||| Sbjct 2640 ACAACGGTTGATTTTCGCTGGTAAACAGTTGGAAGATGGCCGAACTTTATCTGATTATAA 2581 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||||| || ||||| || || || Sbjct 2580 TATTCAGAAAGAATCCACCCTCCA 2557 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCA-CCGACACAGTAGAAACGGTAAAACAAAA 24789 |||||||||||||| || ||||| | ||||| | || || | |||| || || || Sbjct 2453 GGTAAAACTATTACACTTGAAGT-GGAGCCATCGGATACTATTGAAAACGTCAAGGCTAA 2395 Query 24790 GATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACA 24849 || || || || ||||| || || || ||||| ||||| || || ||||| || ||||| Sbjct 2394 AATTCAGGATAAGGAAGGTATTCCGCCTGATCAGCAACGATTAATTTTTGCTGGTAAACA 2335 Query 24850 GCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTT 24909 |||| ||| ||| | || ||||| || || || || |||||||| | || || Sbjct 2334 ATTGGAAGATGGCCGAACTCTTTCGGATTACAATATACAGAAAGAATCGACGTTGCATTT 2275 Query 24910 GGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| || || Sbjct 2274 AGTGTTGCGTTTGCGTGGTGG 2254 >seq41170 Length=8096 Score = 91.5 bits (100), Expect = 1e-13 Identities = 129/179 (72%), Gaps = 8/179 (4%) Strand=Plus/Minus Query 139163 TACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTG 139222 |||||||||||| ||||| ||||| || ||||| ||||||||||| |||||| |||| Sbjct 6533 TACCTAAATTTTTCTGATTACTTTTGCGATTACAGGCATCTTTGTAGAGCATAAACGGGT 6474 Query 139223 TGCCAGTTTCCACTTGTGTCTCTATAATGAAT----TTGAACAAGTCCCTAGCTTGTATT 139278 | |||||||||| ||| | | || | |||| ||||| || | ||||| | | | Sbjct 6473 TACCAGTTTCCATTTGAG---CAATCA-GAATTTCATTGAATAAATTTCTAGCCTTAACT 6418 Query 139279 TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACC 139337 | || | |||| | || |||| || |||||||| || | |||||| |||||| Sbjct 6417 CGGCGGATGTAATTGCCATCTTGCTCATATTTTTCGTAAAGCGCTTCGAATTTTTCACC 6359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449363610914840