Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq47143 102 7e-17 seq7677 102 7e-17 seq18871 84.2 2e-11 >seq47143 Length=13737 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326 || ||||||||||| ||||| ||||||||||| || ||||||||||| | ||| ||| Sbjct 1046 TTCAAAATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCGAG 987 Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386 || |||||| | | | || ||| ||| ||| || || ||||| | || Sbjct 986 CCATCCGATACGATTGAAAATGTTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCTCCA 927 Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 ||||||||| | | || | || || ||||| || || |||| ||||| || || Sbjct 926 GATCAACAACGGTTAATATTCGCCGGAAAACAACTAGAAGATGGAAGAACGTTGAATGAC 867 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCA 110475 || || ||||| |||||||| |||||||| Sbjct 866 TATAATATTCAGAAAGAATCCACGTTGCA 838 >seq7677 Length=6220 Score = 102 bits (112), Expect = 7e-17 Identities = 192/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 ||||| || ||||| ||| | ||||| | |||||| | | | | || || || Sbjct 1763 GGCGGATTCTTCAGAATGTAAGTGTTCAACTTATGAATGGACTTCAAAACTCCATGGAAA 1704 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323 ||||||||||| |||| |||| ||| | |||| | ||| | | ||||| Sbjct 1703 CCGCATGCTTTACAGCTTTGACTGATGCT-ACCTTTCT-----TCACTGTCAATTCAGTT 1650 Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383 || || || ||||| || |||||||| ||| | || || |||||||| | || || Sbjct 1649 TCAGGATTTTCACACTCTGGACACAAAACATATTTCTTAATAAAACCATCTAAAAGATCT 1590 Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACC 34443 ||||| ||| | || || || || || || || || |||| ||||| || |||||| | Sbjct 1589 TGTAATTTAGCCGAATCATGTGAACCATTAACAATATATCGATCGTTCTTTAAATCGAAC 1530 Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 || ||||| || || | ||||| || || || |||||||| Sbjct 1529 TGAGTTTGAGCACCTAATTCGCAGCCAAAATATTTTGTCGG 1489 >seq18871 Length=4271 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CCTGA 110331 |||||||| || || || || || || || ||||| || || | ||| ||| ||| | Sbjct 2252 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAAACGATAACGTTGGAAGTCGAGGCCTCA 2193 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | || ||| ||| ||| ||||| ||||| | || ||||| Sbjct 2192 -GATACAATTGAAAATGTCAAAGCGAAAATTCAAGACAAGGAAGGTATTCCGCCAGATCA 2134 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | | |||| ||| || ||||| || ||||||| | |||| | | ||||| || Sbjct 2133 GCAGCGTTTAATTTTTGCTGGAAAACAACTTGAGGATGGCCGAACGTTATCTGATTATAA 2074 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 |||||||||||||| || |||||| | || ||| | | || || |||| Sbjct 2073 TATTCAAAAAGAATCCACTTTGCACTTAGTTTTACGCTTACGCGGTGGAA 2024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412363843315829