Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq18871 143 2e-29 seq47143 140 2e-28 seq87437 107 1e-18 >seq18871 Length=4271 Score = 143 bits (158), Expect = 2e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| | |||||||| || || ||||| ||||| ||||| || || | | || || Sbjct 2997 AAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGG 3056 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 || || | ||||||||||||| | || |||| ||| ||||| |||||||| || ||| Sbjct 3057 CCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCT 3116 Query 29689 TTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 ||||| || | |||| || || |||| | |||||||| || ||||| | ||| Sbjct 3117 TTGTCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTA 3176 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || ||||| |||||||| ||||| |||||||| |||||| Sbjct 3177 ATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCATT 3215 Score = 136 bits (150), Expect = 3e-27 Identities = 167/227 (74%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | |||||| | || ||||| | || ||| ||| | |||| || ||||| | Sbjct 2761 CCGCCGCGCAAACGTAATACTAAATGCAAGGTCGATCCTTCT-GAATATTGTAATCAGAT 2819 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || || | |||||||||||| | || || | |||||||| || ||| Sbjct 2820 AATGTGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGA 2879 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||||||||| || | || ||| ||| |||| | ||||| ||| || ||| Sbjct 2880 ATACCCTCTTTGTCCTGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCCACT 2939 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 2940 TCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 134 bits (148), Expect = 1e-26 Identities = 152/201 (76%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | |||||||| ||| ||||| | ||| |||||||| || || || ||||||| | Sbjct 2254 CCACCACGCAAACGCAACACTAAATGCAACGTCGATTCTTTCTGTATATTGTAATCCGAA 2313 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | |||||| |||||| | || |||| ||||||||| |||||| Sbjct 2314 AGAGTTCGGCCATCTTCCAATTGTTTACCAGCAAAAATTAATCGTTGCTGATCAGGCGGA 2373 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || || || || |||||| | ||||| |||| | ||| || || | || || Sbjct 2374 ATACCTTCCTTATCCTG-AATTTTAGCCTTGACGTTTTCAATAGTATCCGATGGCTCCAC 2432 Query 29739 TTCAAGAGTTATAGTTTTGCC 29759 |||||| || |||||||| || Sbjct 2433 TTCAAGTGTAATAGTTTTACC 2453 Score = 131 bits (144), Expect = 1e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | ||| || ||||||||||| ||||| |||||||| | | || || | Sbjct 2545 CGTAGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCAGATAAAGTTCGGCCA 2604 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||||| ||||| | ||||| | ||| ||||| || |||||||| ||||| Sbjct 2605 TCTTCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGTGGAATACCTTCTTTA 2664 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || |||||| | ||| || |||| | || || || |||| ||||| | ||||| Sbjct 2665 TCCTG-AATTTTCGCTTTAACGTTTTCAATGGTATCTGATTGTTCAACTTCTAACGTTAT 2723 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| |||||||| ||||| ||||| || ||||| Sbjct 2724 TGTTTTTCCAGTTAATGTTTTTACAAAAATTTGCAT 2759 Score = 129 bits (142), Expect = 5e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 ||||||||||||||||| |||||||| | | || || ||| || |||||||| ||| Sbjct 2056 GTGGATTCTTTTTGAATATTATAATCAGATAACGTTCGGCCATCCTCAAGTTGTTTTCCA 2115 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTT 29708 ||| | || || | |||||||| ||||||||||| || |||||||| |||||| | ||| Sbjct 2116 GCAAAAATTAAACGCTGCTGATCTGGCGGAATACCTTCCTTGTCTTG-AATTTTCGCTTT 2174 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 |||| |||| | || || || || ||||| | ||||| ||||| || || || || Sbjct 2175 GACATTTTCAATTGTATCTGAGGCCTCGACTTCCAACGTTATCGTTTTTCCCGTCAACGT 2234 Query 29769 TTTAACAAATATCTGCAT 29786 || || || || ||||| Sbjct 2235 CTTCACGAAAATTTGCAT 2252 >seq47143 Length=13737 Score = 140 bits (154), Expect = 2e-28 Identities = 168/226 (74%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| | || ||||| | |||||||||||| ||||| ||||| || | || | Sbjct 823 AAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTT 882 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 ||| || |||||||| || || |||| || | ||| ||||| || |||||||| || Sbjct 883 CCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGAATACCTTCC 942 Query 29689 TTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747 || ||||| |||||| | ||| ||| |||| | || || || | || |||||||| || Sbjct 943 TTATCTTG-AATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACTTCAAGCGT 1001 Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAA 29793 || ||||| |||||||| ||||| ||||| || |||||||| ||| Sbjct 1002 AATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATTTTGAAA 1047 >seq87437 Length=6430 Score = 107 bits (118), Expect = 1e-18 Identities = 146/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || ||||| || ||||| |||||||| | || ||| || || | |||||| ||| Sbjct 495 GTCGATTCCTTCTGAATATTATAATCACTTAACGTTCGACCGTCCTCTAATTGTTTTCCA 436 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TT 29708 ||| |||| || | ||||| || || ||||| || || || ||||| ||| |||| || Sbjct 435 GCAAATATTAAGCGCTGCTGGTCTGGAGGAATTCCTTCCTTATCTTG-AATCTTTGCCTT 377 Query 29709 GACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGT 29768 ||| |||| | || || || || || ||||| || || ||||| |||||||| || Sbjct 376 AACATTTTCAATTGTATCTGATGACTCGACCTCAAGCGTAATTGTTTTACCAGTTAACGT 317 Query 29769 TTTAACAAATATCTGCATTTT 29789 ||| || || ||||||||||| Sbjct 316 TTTCACGAAAATCTGCATTTT 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384773409053373