Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_023608.1 Length=42093 Score E Sequences producing significant alignments: (Bits) Value seq56214 693 0.0 >seq56214 Length=539 Score = 693 bits (768), Expect = 0.0 Identities = 473/531 (89%), Gaps = 1/531 (0%) Strand=Plus/Minus Query 24098 CTCATACCGTGCAGGGGAAAGCGGTGTTAAGACGTGGCAAGGCACGGTAGGTTCTACGAC 24157 ||||||||| || ||||| ||||| |||||||| ||||| || || ||||| || || || Sbjct 532 CTCATACCGAGCCGGGGAGAGCGGAGTTAAGACATGGCAGGGAACCGTAGGCTCCACAAC 473 Query 24158 CTCTCGTAACTACAACCTGCAATTCCGGGATTCAGCAGTGCTATACCCTGTATGGGACGG 24217 || || || || || || ||||| || ||||| | ||| | ||||| |||||||| || Sbjct 472 ATCACGAAATTATAATCTTCAATTTCGTGATTCCGTAGTTTTGTACCCGGTATGGGATGG 413 Query 24218 CTTCGATTTAGGCGCAGATACCGACATGAACCCAGAAGATGACCGCCCGGGGGATTTCCC 24277 ||||||||||||||||||||||||||||| || |||| || | || ||||||| ||| Sbjct 412 ATTCGATTTAGGCGCAGATACCGACATGAATCCGGAAGCGGATAGGCCTGGGGATTACCC 353 Query 24278 CATTTCTCAGTACCCGGTACATATGCTCCCTTTAAACCATTTGATAGACAATCTATTTGT 24337 | || |||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 352 TGTATCCCAGTACCCAGTACATATGCTCCCGTTAAACCATTTGATAGACAATCTATTTGT 293 Query 24338 TAGAGGTTCGCTGGGGGTAGGTTTCGGTATGGACGGGCAAGGTCTGTATGTCTCTAACAT 24397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 292 TAGAGGTTCGCTGGGGGTAGGTTTCGGTATGGACGGGCAAGGTCTGTATGTCTCTAACAT 233 Query 24398 AACCGTCGAGGATTGCGCTGGTTCTGGGGCTTATATTCTTGCCCACGAAACAGTATTCAC 24457 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 232 AACCGTCGAAGATTGCGCTGGTTCTGGGGCTTATATTCTTGCCCACGAAACAGTATTCAC 173 Query 24458 TAATATCGCAATAATCGACACCAATACTAAAAACTTCCCCGCGAACCAGATATATATCTC 24517 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 172 TAATATCGCAATAATCGACACCAATACTAAAAACTTCCCTGCGAACCAGATATACATCTC 113 Query 24518 AGGGGCCTGCCGTGTAAACGGCCTTCGTTTGGTCGGCATCCGTTCAACTACCGAACAGGG 24577 ||||| |||||||| |||||||| || |||||||||||||| ||||||||||||||||| Sbjct 112 GGGGGCATGCCGTGTTAACGGCCTACG-TTGGTCGGCATCCGGTCAACTACCGAACAGGG 54 Query 24578 CATGACGATAGACGCACCTAACTCCACTGTAAGCGGAATAACGGGCTTCGT 24628 | | ||||||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 53 CCTTACGATAGACGCGCCTAACTCCACTGTGAGCGGTATAACCGGCTTCGT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134424256560230