Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq22704 185 3e-41 seq48715 113 1e-19 seq80663 84.2 7e-11 >seq22704 Length=991 Score = 185 bits (204), Expect = 3e-41 Identities = 233/320 (73%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 188878 GGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTAC 188937 |||||||||||||| |||||||||| ||| || ||| || | |||||||| |||| Sbjct 3 GGTTATGTAGGTGATGATGTGGAAAGCGTGTTATCGCGTCTATTGCAAGCAGCAAATTAT 62 Query 188938 GATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGA 188997 ||| | | | || ||||||| || || | ||| |||||| |||||||||| | || Sbjct 63 GATGTTGCAAAGGCACAACGTGGTATAGTGTTTATAGATGAAATAGATAAAATCACAAGG 122 Query 188998 AAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTA 189057 ||||| ||| | || || || || || || || || || |||||||| ||||||||| | Sbjct 123 AAATCTGAAGGTACTTCGATAACACGTGACGTCTCAGGTGAAGGAGTCCAGCAAGCTCTG 182 Query 189058 TTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCT 189117 | || || || ||||| |||||||| | ||||| || || || || || |||||||| Sbjct 183 CTTAAGATTATGGAAGGCACAGTTGCTTACGTTCCGCCACAGGGAGGACGGAAACACCCG 242 Query 189118 CACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTT 189177 || || || | | || | || || | |||||| |||||||| ||| ||||| ||| Sbjct 243 CAACAGGAGTTTGTACAAGTGGACACTAATAATATACTGTTTATTTGTGGGGGAGCTTTT 302 Query 189178 GATGGTCTTGAAAACATTAT 189197 || ||| | || || || || Sbjct 303 GAAGGTTTAGATAAGATCAT 322 >seq48715 Length=2408 Score = 113 bits (124), Expect = 1e-19 Identities = 272/405 (67%), Gaps = 9/405 (2%) Strand=Plus/Plus Query 188793 AGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCTC 188852 ||| |||||||| || || || || | ||| | ||| ||||||| | || || | Sbjct 522 AGGAAAAACATTGTTAGCGCAGACCATTGCTCAGTGTTTAGATGTACCATTTGCAATTTG 581 Query 188853 TGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGT-ATTGC 188911 |||| || |||||||| |||| |||||||| ||||||||| | |||| || |||| Sbjct 582 TGATTGTACAACTTTAACACAAGCCGGTTATGTGGGTGAAGATATTGAAAGTGTGATTGG 641 Query 188912 TTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATA 188971 ||| | | |||| |||| | | | | || ||| || |||||| || | Sbjct 642 AAAGTT-ACTACAAGATGCTGGATTCAGTGTAGATCGAGCACAAACTGGAATCGTTTTCT 700 Query 188972 TCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTAT 189031 | |||||||| |||||||||| | ||| || ||||| |||| ||||||| Sbjct 701 TAGATGAAGTTGATAAAATTGGTGCTGTTCCAGGAAT-ACATCAGTTAC--GAGATGTGG 757 Query 189032 CTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTC 189091 |||||||||||| || |||| | || ||||| |||| ||||| |||| ||| || | Sbjct 758 GTGGCGAAGGAGTTCAACAAGGCATGTTGAAAATGCTTGAGGGTACGGTTGTGAATGTGC 817 Query 189092 CTCCTCAAGGTGGTCGTAAACACCCTCACCA--AGAAATGCTTGAAATAGATACAACTAA 189149 || |||| || | | | | | ||||| || |||| || ||||| || Sbjct 818 --CCGAAAGGAATTCACCACGAAAATTAAGAGGAGAAACTATTCAAATCGACACAACAAA 875 Query 189150 TATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACAT 189194 ||| |||||| | | ||||||| | | |||| |||||||| || Sbjct 876 TATTTTGTTTGTAGCTAGTGGAGCTTATAATGGACTTGAAAAAAT 920 >seq80663 Length=1316 Score = 84.2 bits (92), Expect = 7e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 403943 GCCTGTAGCTCAGCTGGATAGAGCACGAGCCTTCTAAGCCCGCGGTCGTAGGTTCGAATC 404002 ||| ||||||||||||||||||||| |||||||||||| || |||||||||||||| Sbjct 162 GCCCGTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGCCGTAGGTTCGAATC 103 Query 404003 CTACCAGGC 404011 ||||| ||| Sbjct 102 CTACCGGGC 94 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1589973705188544