Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq18871 199 8e-46 seq47143 179 7e-40 seq87437 170 4e-37 seq73680 98.7 2e-15 >seq18871 Length=4271 Score = 199 bits (220), Expect = 8e-46 Identities = 177/219 (81%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 82593 AAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA 82652 || || | ||||||||||| ||| |||||||| || |||||||||||||||| ||| Sbjct 2035 AAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCAGATAACGTTCGG 2094 Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || || || ||||||||||||||||| |||| | || |||||||| || || |||||| Sbjct 2095 CCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGGAATACCTTCC 2154 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCTACTTCCAAAGT 82771 || |||||||| || ||||| ||||||||||| ||||| | ||| || |||||||| || Sbjct 2155 TTGTCTTGAATTTTCGCTTTGACATTTTCAATTGTATC-TGAGGCCTCGACTTCCAACGT 2213 Query 82772 TATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || || ||||||||||| || || || ||||| Sbjct 2214 TATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 Score = 170 bits (188), Expect = 4e-37 Identities = 169/217 (78%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||||| || || || ||||||||||| |||||||||||||||| | ||| || Sbjct 2545 CGTAGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCAGATAAAGTTCGGCCA 2604 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | ||||| ||||| || || | | |||||||||||| || || ||||| ||| Sbjct 2605 TCTTCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGTGGAATACCTTCTTTA 2664 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATC--ATTAGGTTCTACTTCCAAAGTTA 82773 || ||||| || ||||| || |||||||| ||||| ||| |||| ||||| || |||| Sbjct 2665 TCCTGAATTTTCGCTTTAACGTTTTCAATGGTATCTGATT--GTTCAACTTCTAACGTTA 2722 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || || || || || |||||||| || ||||| Sbjct 2723 TTGTTTTTCCAGTTAATGTTTTTACAAAAATTTGCAT 2759 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 82593 AAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA 82652 ||||| | || || |||||||||||||| || || || || || || |||| | | Sbjct 2997 AAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGG 3056 Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 |||||||||| |||||| |||||||| |||| || |||||||||||| || |||||||| Sbjct 3057 CCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCT 3116 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || || || || ||||| || || |||||||| || ||| | || ||||||||||| Sbjct 3117 TTGTCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTA 3176 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 ||||| || || || || || || |||||||| |||||| || Sbjct 3177 ATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCATTCTT 3218 Score = 158 bits (174), Expect = 2e-33 Identities = 172/227 (76%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | |||||| | ||||| |||| || ||| ||| ||| ||||| ||||||||| Sbjct 2761 CCGCCGCGCAAACGTAATACTAAATGCAAGGTCGATCCTT-CTGAATATTGTAATCAGAT 2819 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | |||||| |||| ||||| |||||||| |||| | || |||||||| || Sbjct 2820 AATGTGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGA 2879 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || || || || ||||| ||||| ||||||||||| || || || || ||| Sbjct 2880 ATACCCTCTTTGTCCTGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCCACT 2939 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| ||||| || || || || ||||| |||||||| |||||||| Sbjct 2940 TCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 156 bits (172), Expect = 8e-33 Identities = 160/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | |||||||| ||||| |||| || ||||||||||||||||| ||||| | Sbjct 2252 TACCACCACGCAAACGCAACACTAAATGCAACGTCGATTCTTTCTGTATATTGTAATCCG 2311 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| ||| || ||||| | |||||| |||||||| |||| || ||| ||||| || | Sbjct 2312 AAAGAGTTCGGCCATCTTCCAATTGTTTACCAGCAAAAATTAATCGTTGCTGATCAGGCG 2371 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| ||||| || || || || |||||||| ||||| || || | Sbjct 2372 GAATACCTTCCTTATCCTGAATTTTAGCCTTGACGTTTTCAATAGTATCCGATGGCTCCA 2431 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAA 82789 |||| | || || || || ||| |||| Sbjct 2432 CTTCAAGTGTAATAGTTTTACCT-TCAA 2458 >seq47143 Length=13737 Score = 179 bits (198), Expect = 7e-40 Identities = 171/219 (78%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 82593 AAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA 82652 ||||| | ||||| |||| || ||||||||||| |||||||| ||| | |||| Sbjct 823 AAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTT 882 Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||||||||||||||| || || |||| | ||||||||||||||| || |||||| Sbjct 883 CCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGAATACCTTCC 942 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 ||||||||||| || ||||| ||||||||||||||||| || || ||||| | || Sbjct 943 TTATCTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACTTCAAGCGTA 1002 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || || || || || || || ||||| || |||||| Sbjct 1003 ATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATT 1041 >seq87437 Length=6430 Score = 170 bits (188), Expect = 4e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 82593 AAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA 82652 || || | ||||| |||| || ||||| ||||| |||||||||||| || ||| | Sbjct 516 AAGCGTAAAACTAGATGCAATGTCGATTCCTTCTGAATATTATAATCACTTAACGTTCGA 457 Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 ||||| |||| ||||||||||||||| |||| | || || |||||||| ||||||||| Sbjct 456 CCGTCCTCTAATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAGGAATTCCTTCC 397 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 ||||||||||||||||| || ||||||||||| ||||| | || || || | || Sbjct 396 TTATCTTGAATCTTTGCCTTAACATTTTCAATTGTATCTGATGACTCGACCTCAAGCGTA 337 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || || || || ||||| || || || ||||||||| Sbjct 336 ATTGTTTTACCAGTTAACGTTTTCACGAAAATCTGCATT 298 >seq73680 Length=8834 Score = 98.7 bits (108), Expect = 2e-15 Identities = 184/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 198183 GAACTGTCGGATAATTTTTGTTACTATAATAAACATTACGATAGCGTACAGTCTACTCAC 198242 |||||||| ||||||| ||||| || ||| ||||||||||| | | | ||| Sbjct 7546 GAACTGTCCGATAATTACTGTTATTACAATGAACATTACGATTCTATTGATGGTGCTCCA 7605 Query 198243 GCATGGGCT-AGAAGAACATTAGAAGATCACATTAATGATCCTAGAAAGTATATCTATTC 198301 | |||||| |||||| |||| | ||||| || ||| | ||||| | ||| | Sbjct 7606 GACTGGGCTCAGAAGA-CATTGAATGATCATCGGAAGGATAAACGCGAGTATTTGTATAC 7664 Query 198302 TATTAAACAACTCGAAAAGGCGGAAACACATGACCCTCTATGGAATGCATCGCAAATACA 198361 |||||||| | |||| || |||| || || ||| ||||||||| |||||| | Sbjct 7665 ACTTAAACAATTTGAAAGTGCAAAAACGCACGATCCTTTATGGAATGGTGCGCAAAATGA 7724 Query 198362 GATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGAATGTACTGGGCTAAAAAGATACT 198421 | ||| | || ||||| ||| |||| | ||||||| ||||||||||| || | Sbjct 7725 ACTACTAAAACGGGGCAAAATACATGGTTTCATGCGAATGTATTGGGCTAAAAAAATTTT 7784 Query 198422 TGAATGGACAAGAACACCGGAAGACGCT 198449 ||||||| || | || ||||| ||| Sbjct 7785 GGAATGGAGCAGTTCGCCCGAAGAAGCT 7812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980632723449067