Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq73680 102 1e-16 seq87437 91.5 3e-13 >seq73680 Length=8834 Score = 102 bits (112), Expect = 1e-16 Identities = 185/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 182866 GAACTATCGGATAATTTTTGTTACTATAATAAACATTACGATAGTGTTCAGTCTACTCAC 182925 ||||| || ||||||| ||||| || ||| ||||||||||| | || | | ||| Sbjct 7546 GAACTGTCCGATAATTACTGTTATTACAATGAACATTACGATTCTATTGATGGTGCTCCA 7605 Query 182926 GCATGGGCT-AGAAGAACATTAGAAGATCACGTTAATGATCCTAGAAAGTATATCTATTC 182984 | |||||| |||||| |||| | ||||| || ||| | ||||| | ||| | Sbjct 7606 GACTGGGCTCAGAAGA-CATTGAATGATCATCGGAAGGATAAACGCGAGTATTTGTATAC 7664 Query 182985 TATTAAACAACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACA 183044 |||||||| | |||| ||| |||| || || ||| ||||||||| | |||| | Sbjct 7665 ACTTAAACAATTTGAAAGTGCAAAAACGCACGATCCTTTATGGAATGGTGCGCAAAATGA 7724 Query 183045 GATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACT 183104 | | | | || ||||| ||| |||| | |||||||| ||||||||||| || | Sbjct 7725 ACTACTAAAACGGGGCAAAATACATGGTTTCATGCGAATGTATTGGGCTAAAAAAATTTT 7784 Query 183105 TGAATGGACAAGAACTCCGGAAGATGCT 183132 ||||||| || | || ||||| ||| Sbjct 7785 GGAATGGAGCAGTTCGCCCGAAGAAGCT 7812 >seq87437 Length=6430 Score = 91.5 bits (100), Expect = 3e-13 Identities = 98/132 (74%), Gaps = 11/132 (8%) Strand=Plus/Minus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 |||||||||| |||||||||||| || |||| || ||| ||||| ||| Sbjct 491 ATTCCTTCTGAATATTATAATCACTTAACGTTCGACCGTCCTCTAATTGTTTTCCAGCAA 432 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | |||| | || || ||||| | ||| |||||||||||||||||||||| || | || Sbjct 431 ATATTAAGCGCTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGAATCTTTGCCTTAACAT 372 Query 81760 TTTCAATCGTAT 81771 ||||||| |||| Sbjct 371 TTTCAATTGTAT 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902338929954080