Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq18871 91.5 1e-13 >seq18871 Length=4271 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/208 (72%), Gaps = 5/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| || || ||||| ||||||||||| | ||| ||| |||||| | Sbjct 2782 AAATGCAAGGTCGA-TCCTTCTGAATATTGTAATCAGATAATGTGCGACC-GTCCTCTAA 2839 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| ||||| || |||| | ||||||||| || || || || || || ||||| ||| Sbjct 2840 CTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGAATACCCTCTTTGTCCTGGAT 2899 Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| | | | |||| ||||| | | |||||| || | || | ||||| | Sbjct 2900 CTTG-GCTTTAACATTTTCAATTGTGTCTGAAGACTCCACTTCCAATGTTATAGTTTTTC 2958 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || | |||||||| ||||||||||| Sbjct 2959 CAGTTAACGTTTTTACAAAAATCTGCAT 2986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482847021809720