Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq18871 136 3e-27 seq47143 102 5e-17 seq87437 93.3 3e-14 >seq18871 Length=4271 Score = 136 bits (150), Expect = 3e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 33532 AAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGT 33591 |||||||| |||||||| ||||| || ||||| |||||||| ||||| | || || Sbjct 2997 AAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGG 3056 Query 33592 TCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCT 33651 |||| || |||||||| || |||||||| || || || |||||| |||| | |||||| Sbjct 3057 CCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCT 3116 Query 33652 TTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGT 33710 ||||| ||||| || | ||| | || | ||||| ||| || || || | || Sbjct 3117 TTGTCCTGGATTTT-TGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGT 3175 Query 33711 GATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||||||||| ||||| ||||| ||||| || ||||| Sbjct 3176 AATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 Score = 131 bits (144), Expect = 1e-25 Identities = 168/228 (74%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | ||||||||| || ||||| | || | || || || || |||||||| || Sbjct 2761 CCGCCGCGCAAACGTAATACTAAATGCAAGGT-CGATCCTTCTGAATATTGTAATCAGAT 2819 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | |||||| |||| || || ||||| || |||||||| || |||||||||||| | || Sbjct 2820 AATGTGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGA 2879 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| |||||||| || || | || ||||| || | ||||| || ||||| Sbjct 2880 ATACCCTCTTTGTCCTGGATCTT-GGCTTTAACATTTTCAATTGTGTCTGAAGACTCCAC 2938 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || ||||| || ||||||||||||||||| |||||||| Sbjct 2939 TTCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||||| || || || | |||| |||||||| || || ||||| || Sbjct 2026 CCACCGCGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCAGAT 2085 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || | || || | ||||||||| |||||||| ||||||||||||||| |||| Sbjct 2086 AACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGGA 2145 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| ||||| ||||||| | || |||| || | || || | || || Sbjct 2146 ATACCTTCCTTGTCTTGAATTTTC-GCTTTGACATTTTCAATTGTATCTGAGGCCTCGAC 2204 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||| |||||||| || || ||||| || || || || |||||| Sbjct 2205 TTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCATA 2253 Score = 111 bits (122), Expect = 1e-19 Identities = 173/241 (72%), Gaps = 6/241 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||||| | |||| || | ||| || ||| ||||| || || Sbjct 2521 AAAATCTGCATTCCACCTCGTAGCCGTAGAACTAGATGGAGGGTGGATTCTTTCTGAATA 2580 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || ||||| || | || || | || ||||| ||||| || || |||||||| || || Sbjct 2581 TTATAATCAGATAAAGTTCGGCCATCTTCCAACTGTTTACCAGCGAAAATCAACCGTTGT 2640 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTC 33689 |||||| | || | ||||||||| || ||||||| ||| ||| | ||| ||| || Sbjct 2641 TGATCTGGTGGAATACCTTCTTTATCCTGAATTTTCGCTTT-AACGTTTTCAATGGTATC 2699 Query 33690 -GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCA 33748 | ||| ||| || || | ||| || ||||| || ||||| ||||||||||| || |||| Sbjct 2700 TGATTG-TTCAACTTCTAACGTTATTGTTTTTCCAGTTAATGTTTTTACAAAAATTTGCA 2758 Query 33749 T 33749 | Sbjct 2759 T 2759 Score = 102 bits (112), Expect = 5e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | |||||| ||||| ||||| | || ||||| ||||| |||||||| || Sbjct 2253 ACCACCACGCAAACGCAACACTAAATGCAACGTCGATTCTTTCTGTATATTGTAATCCGA 2312 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || ||||||||||| || |||||||| || || |||||||| |||| Sbjct 2313 AAGAGTTCGGCCATCTTCCAATTGTTTACCAGCAAAAATTAATCGTTGCTGATCAGGCGG 2372 Query 33642 CACACCTTCTTTGTCGGCAATTTT 33665 | |||||| || || |||||| Sbjct 2373 AATACCTTCCTTATCCTGAATTTT 2396 >seq47143 Length=13737 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | |||||||| || ||||| | ||| ||||| || || || || || Sbjct 814 CCACCGCGTAAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTC 873 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || | | | || || | |||||||||||| || || || || || |||||| | || Sbjct 874 AACGTTCTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGA 933 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| || || ||||||| | || ||||| || | || ||| || || || Sbjct 934 ATACCTTCCTTATCTTGAATTTTC-GCTTTAACATTTTCAATCGTATCGGATGGCTCGAC 992 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||| || |||||||| ||||| ||||| ||||| || ||||| Sbjct 993 TTCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCAT 1040 >seq87437 Length=6430 Score = 93.3 bits (102), Expect = 3e-14 Identities = 117/158 (74%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 33593 CGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTT 33652 |||| || ||||||||||| ||||| || || |||||||| ||| | || | ||||| | Sbjct 455 CGTCCTCTAATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAGGAATTCCTTCCT 396 Query 33653 TGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTG 33711 | || ||| || || | ||||| ||| || || ||| || || |||| ||| Sbjct 395 TATCTTGAATCTT-TGCCTTAACATTTTCAATTGTATCTGATGACTCGACCTCAAGCGTA 337 Query 33712 ATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||||||| ||||||||||| || || |||||||| Sbjct 336 ATTGTTTTACCAGTTAACGTTTTCACGAAAATCTGCAT 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328323610685760