Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq18871 104 6e-17 seq47143 84.2 5e-11 >seq18871 Length=4271 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||||| | || || |||||||| ||||||||||| || |||||| Sbjct 3211 CAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTCATCTGAC 3152 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| || ||| ||| || || || |||||||||||| ||| || ||| Sbjct 3151 ACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGATCAACAA 3092 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || || || || || ||||| || | || || |||| |||||| || Sbjct 3091 CGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTATCCGACTACAACATC 3032 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || || || |||||||| || Sbjct 3031 CAAAAGGAATCTACTCTGCA 3012 Score = 86.0 bits (94), Expect = 1e-11 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || |||||||| || || || ||||| ||| || || || | ||| Sbjct 2744 AAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGAACAATCAGATACCATTGAAAAC 2685 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| ||||| || |||||||| ||| || || ||| | | || || Sbjct 2684 GTTAAAGCGAAA-ATTCAGGATAAAGAAGGTATTCCACCAGATCAACAACGGTTGATTTT 2626 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || || |||||||||||||| | ||||| | ||||| || | |||||||| || Sbjct 2625 CGCTGGTAAACAGTTGGAAGATGGCCGAACTTTATCTGATTATAATATTCAGAAAGAATC 2566 Query 206364 TACTCTTCACCTTGTT 206379 || || || || ||| Sbjct 2565 CACCCTCCATCTAGTT 2550 >seq47143 Length=13737 Score = 84.2 bits (92), Expect = 5e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 204776 GTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 204835 || || |||||||| | |||||||||| ||| || ||||||||||| || || |||||| Sbjct 844 GTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTTCCATCTTCTAGTTGTTTTCCG 903 Query 204836 GCGAAGATAAGCCGTTGTTGA 204856 ||||| || | |||||||||| Sbjct 904 GCGAATATTAACCGTTGTTGA 924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180383014172713