Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq47143 114 1e-20 seq18871 95.1 1e-14 seq87437 84.2 2e-11 >seq47143 Length=13737 Score = 114 bits (126), Expect = 1e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 || || || || || ||||| | | || ||||| ||||| || ||||| ||| || Sbjct 820 CGTAAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTCAACGTT 879 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 | |||||| || ||||| |||| | |||| || |||||||||||||| || ||| Sbjct 880 CTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGAATACCT 939 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || ||||| |||||| ||| | | ||| | ||||||| ||||| ||||| | | Sbjct 940 TCCTTATCTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACTTCAAGC 999 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||||||||| | |||||| | ||||| ||||| Sbjct 1000 GTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCAT 1040 >seq18871 Length=4271 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| || || || |||||||| | | || || ||||| |||||||||||| | || Sbjct 2993 ACGTAAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGT 3052 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||||| | ||||| || | | | |||| || ||||||||||| || || || Sbjct 3053 ACGGCCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCC 3112 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 |||||| || |||||| || | | ||| | || || | | ||| ||||| | Sbjct 3113 TTCTTTGTCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAA 3172 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | |||||||||||| | |||||| | || || ||||| Sbjct 3173 AGTAATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 || ||||| ||||| || || | | || ||||||||||| || || || | || Sbjct 2032 CGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCAGATAACGTT 2091 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || ||| || || ||||| || | | | |||| |||||| |||||||| || || ||| Sbjct 2092 CGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGGAATACCT 2151 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || |||||| ||| | | ||| | ||||| | | ||| ||||| | | Sbjct 2152 TCCTTGTCTTGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGGCCTCGACTTCCAAC 2211 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | |||||| || |||| || || | |||||| ||||| Sbjct 2212 GTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | | || ||||| ||||| || || || | || || |||||| Sbjct 2550 AACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCAGATAAAGTTCGGCCATCTTC 2609 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||||||||| | | || | || ||||||||||| || || ||||||||||| Sbjct 2610 CAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGTGGAATACCTTCTTTATCCTG 2669 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| ||| | | ||| | ||||| | | || ||||| | ||| | ||||| Sbjct 2670 AATTTTCGCTTTAACGTTTTCAATGGTATCTGATTGTTCAACTTCTAACGTTATTGTTTT 2729 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 ||||| | ||||||| ||||| |||||| Sbjct 2730 TCCAGTTAATGTTTTTACAAAAATTTGCATG 2760 >seq87437 Length=6430 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 || ||||| ||||| | ||| | | || || || ||||| || || || || | || Sbjct 519 CGTAAGCGTAAAACTAGATGCAATGTCGATTCCTTCTGAATATTATAATCACTTAACGTT 460 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || || || | ||||| || | | | |||| ||||| || |||||||| || ||| Sbjct 459 CGACCGTCCTCTAATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAGGAATTCCT 400 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || ||||| ||| ||| || | | ||| | ||||| | | ||| || || | | Sbjct 399 TCCTTATCTTGAATCTTTGCCTTAACATTTTCAATTGTATCTGATGACTCGACCTCAAGC 340 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||||||||||| | ||||| | |||||||||||| Sbjct 339 GTAATTGTTTTACCAGTTAACGTTTTCACGAAAATCTGCAT 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476045504209080