Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq18871 118 1e-21 seq87437 105 6e-18 seq47143 91.5 1e-13 >seq18871 Length=4271 Score = 118 bits (130), Expect = 1e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || |||||||| | || |||||||| | ||| |||||||| |||||||| |||| Sbjct 2988 CCGCCACGTAAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAT 3047 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || |||| || | || || || ||||| || || || || || || | ||| Sbjct 3048 AACGTACGGCCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGA 3107 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || |||||| ||| ||| ||| | || | | ||||| || || || Sbjct 3108 ATTCCTTCTTTGTCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACT 3167 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTG 35742 |||| || ||||||||||| || ||||||||||||||||| |||||||| || Sbjct 3168 TCCAAAGTAATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCATTCTTTG 3220 Score = 104 bits (114), Expect = 2e-17 Identities = 151/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584 || || ||||| || || | ||||| ||||| |||||||| | || || || |||| Sbjct 2776 AATACTAAATGCAAGGT-CGATCCTTCTGAATATTGTAATCAGATAATGTGCGACCGTCC 2834 Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 || | ||| || || ||||| || ||||||||||| || | |||| | ||| |||||| Sbjct 2835 TCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGGAATACCCTCTTTGTCC 2894 Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704 |||||| || | | || | | ||||| || ||||| |||| || || ||| Sbjct 2895 TGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCCACTTCCAATGTTATAGTT 2954 Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || || ||||| ||||| |||||||| Sbjct 2955 TTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 >seq87437 Length=6430 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| ||||| | || || | ||| || || ||||| ||||| || ||||| Sbjct 525 CCACCGCGTAAGCGTAAAACTAGATGCAATGTCGATTCCTTCTGAATATTATAATCACTT 466 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || ||||| |||| || | || || || |||||||| || ||||||||||| | |||| Sbjct 465 AACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAGGA 406 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| || |||||| ||| | | || | | || || || || ||| Sbjct 405 ATTCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCAATTGTATCTGATGACTCGACC 346 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||| || |||||||| || || |||||||| || ||||||||| || Sbjct 345 TCAAGCGTAATTGTTTTACCAGTTAACGTTTTCACGAAAATCTGCATTTTG 295 >seq47143 Length=13737 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| ||||| | || || ||||| ||||| || || ||||| || || || | Sbjct 814 CCACCGCGTAAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTC 873 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| | || || || || || || || ||||| ||||| || || || | |||| Sbjct 874 AACGTTCTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGA 933 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAG-AGTTGCCACCGTGTCGCTCGATTCCAC 35688 | | ||||| || ||| ||| |||| | | || | | ||| ||| | || || Sbjct 934 ATACCTTCCTTATCT-TGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGAC 992 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||| || |||||||| || |||||||||||||| || |||||| || Sbjct 993 TTCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATTTTG 1044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450258547441240