Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5310 98.7 1e-15 >seq5310 Length=1504 Score = 98.7 bits (108), Expect = 1e-15 Identities = 133/185 (72%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 |||||||||| | || ||||||||||| ||||| || |||||| ||| || ||||| Sbjct 496 CCAGGCATTAAGCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAA 555 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT--- 39793 |||||||| || || ||||| |||| || | || ||| | ||| || | || | Sbjct 556 ATGCCTTCGACAGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAA 615 Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853 ||||| || |||||||| |||||||| || ||||| || || || || ||||| Sbjct 616 ATCCATTTTAAGGCCCAATCGGCTTTCTTTTTAACACATGGAATCGTAGTGATTGCATTG 675 Query 39854 AAGAG 39858 || || Sbjct 676 AAAAG 680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686093499358920