Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_027399.1 Length=346602 Score E Sequences producing significant alignments: (Bits) Value seq65769 84.2 5e-11 >seq65769 Length=5750 Score = 84.2 bits (92), Expect = 5e-11 Identities = 189/277 (68%), Gaps = 19/277 (7%) Strand=Plus/Plus Query 49257 CGTTTTGATATGTCAGAGTTTTCGCAAGACCACACTGTATCTAAACTTATTGGTTCACCT 49316 || || ||||||||||||| | | || | || || | ||| | ||||| | || Sbjct 5237 CGCTTAGATATGTCAGAGTATCAGGAAAAACATGAAGTTGCGAAATTGATTGGAGCTCCA 5296 Query 49317 CCTGGATATGTAGGACATGAAACAGGAAATGGTCAGCTTCTTGATAAA---GTT--GAAC 49371 ||||| ||||| || |||||| || ||| ||| |||| ||| ||| ||| Sbjct 5297 CCTGGCTATGTGGGTCATGAAGATGG---TGGCCAG----TTGACAAAACAGTTACGAAA 5349 Query 49372 AATTCCCTAATGCAGTACTTCTACTGGATGAAATTGAAAAAGCACATCCAAAAGTACTG- 49430 || || |||||| ||| ||||| | |||||| | || ||||| ||||| | || | Sbjct 5350 AACTCG-TAATGCGGTAGTTCTATTTGATGAAGTCGATAAAGCGCATCCCGATGTCTTAA 5408 Query 49431 CTGACATTC--CTACAAGTATTGGATGAAGGGCGTTTGACTGGTTCACAAGGAAAAACAG 49488 ||| ||| ||||| | || |||||||| |||||||| | | |||||||||||| Sbjct 5409 CTG---TTCTGCTACAGTTGTTCGATGAAGGACGTTTGACGGATGGTCAAGGAAAAACAA 5465 Query 49489 TTTACTTTAATAATATTACTGTTATTATGACTACAAA 49525 || | | || || | | ||||||||||| |||| Sbjct 5466 TTGAATGTAGAGATGCGATTTTTATTATGACTTCAAA 5502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1107646012728047