Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq18871 125 6e-24 seq47143 109 5e-19 >seq18871 Length=4271 Score = 125 bits (138), Expect = 6e-24 Identities = 168/230 (73%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-G 27077 |||| |||||||| || ||||| ||||| || || || || || ||||||||||| || | Sbjct 2759 TGCCGCCGCGCAAACGTAATACTAAATGCAAGGTCGA-TCCTTCTGAATATTGTAATCAG 2817 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 | ||| |||| |||| || | |||||| || || |||| | ||||| ||||| || Sbjct 2818 ATAATG-TGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGT 2876 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||||||||| || ||||||| ||| | |||| | ||||||| | || Sbjct 2877 GGAATACCCTCTTTGTCCTGGATCTTGGCTTTAACATTTTCAATTGTGTCTGAAGACTCC 2936 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| | ||||||| ||| || || | ||||| ||||| || ||||| Sbjct 2937 ACTTCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || ||||| || || || || || || || || || |||||||||||||| || || | | Sbjct 2026 CCACCGCGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCAGAT 2085 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || | || || || ||||| || || |||| | |||||| ||||| ||||| Sbjct 2086 AACGTT-CGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGG 2144 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| || || || || || ||| | |||| | || |||| ||| || || Sbjct 2145 AATACCTTCCTTGTCTTGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGGCCTCGAC 2204 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| | ||||| | ||| ||||||| || ||||| || ||||||||| Sbjct 2205 TTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCATA 2253 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || || || ||||||||||| | ||||| || ||||| || ||||||||| Sbjct 2988 CCGCCACGTAAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAT 3047 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || ||||||| | ||||| || || |||| | || |||||||| ||||| Sbjct 3048 AACGTACGGCCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGA 3107 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || ||||| || ||| || || | | |||| | ||||| | | || ||| Sbjct 3108 ATTCCTTCTTTGTCCTGGATTTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACT 3167 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | ||| || | ||| || || | |||||||||||| |||||||| Sbjct 3168 TCCAAAGTAATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 Score = 98.7 bits (108), Expect = 8e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || ||||| |||||||| || || | | | ||| || | ||||| | ||||||||| Sbjct 2563 GTGGATTCTTTCTGAATATTATAATCAGATAAAGTTCGGC-CATCTTCCAACTGTTTACC 2621 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| |||| | || |||||||| || || | ||| |||||||| || || ||| Sbjct 2622 AGCGAAAATCAACCGTTGTTGATCTGGTGGAATACCTTCTTTATCCTGAATTTTCGCTTT 2681 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | |||| | || |||| ||||||||||| ||||| | ||| || || | || Sbjct 2682 AACGTTTTCAATGGTATCTGATTGTTCAACTTCTAACGTTATTGTTTTTCCAGTTAATGT 2741 Query 27230 TTTCACAAAGATTTGCAT 27247 ||| ||||| |||||||| Sbjct 2742 TTTTACAAAAATTTGCAT 2759 >seq47143 Length=13737 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| || || || || ||||| ||||| || ||||| |||||||| ||||| | Sbjct 813 GCCACCGCGTAAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATT 872 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || | | | ||||| || ||||| |||||| | || | || |||||||| || || Sbjct 873 CAACGTTCTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGG 932 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAA 27198 | ||| || ||||| || || ||| | |||| | || || | ||||| | | Sbjct 933 AATACCTTCCTTATCTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCT-CGA 991 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||| || || || | ||| || || | |||||||||||| |||||||| Sbjct 992 CTTCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCAT 1040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424442649047736