Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq63428 105 8e-18 >seq63428 Length=944 Score = 105 bits (116), Expect = 8e-18 Identities = 255/381 (67%), Gaps = 19/381 (5%) Strand=Plus/Plus Query 11443 GATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATT 11502 ||||| || ||||||||||| || | ||| || || ||| | | ||| ||||| Sbjct 211 GATCTGACGGTCAAAACGACCAGGTCTAAGCAGTGCTGGATCTAAAACATCTGGACGATT 270 Query 11503 AGTGGCCGCAATAACCACAATGCCAGTCTCATTG---TCAAAGCCATCCATCTCGGTGAG 11559 ||| || |||| | | || || ||||| ||||| |||||||| || | Sbjct 271 AGTTGCAGCAA---CTATTATCACACCTTCATTAGACTCAAAACCATCCATTTCAACTAA 327 Query 11560 TAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTG---CG 11616 ||| ||||| | |||||||||||||| ||| |||| | |||| | || || || Sbjct 328 TAACTGATTTAACGTTTGTTCTCTCTCGTCA-TTGCCACC--ACCAAGACCAATGCCACG 384 Query 11617 TTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGG---TTGATTTTCGCG 11673 ||| | ||||| ||||| || ||||| ||||| | ||||| || || |||| Sbjct 385 ATGCCTACCCACTGCATCTATTTCATCTATGAAAATTATACACGGAGCGTGTTTTT---- 440 Query 11674 GGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAA 11733 | | ||||| | ||| || || | | ||||| |||||||||||||| || ||||| Sbjct 441 GCCTTGATCAAACATATCACGCACACGACTTGCACCAACACCAACAAACATTTCGACAAA 500 Query 11734 GTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAG 11793 | | ||||| | |||||| || || | |||||| || || || || || || Sbjct 501 ATCAGATCCAGAGATGCTAAAGAATGGCACGTTAGCTTCACCTGCAATTGCGCGAGCAAG 560 Query 11794 GAGGGTCTTTCCCGTACCTGG 11814 |||||||| || || || || Sbjct 561 TAGGGTCTTACCAGTTCCAGG 581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627286580968800