Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq87437 168 8e-37 seq18871 159 4e-34 seq47143 136 5e-27 >seq87437 Length=6430 Score = 168 bits (186), Expect = 8e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || || ||| | || || || || ||||| |||||||| |||||| Sbjct 298 AATGCAGATTTTCGTGAAAACGTTAACTGGTAAAACAATTACGCTTGAGGTCGAGTCATC 357 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| |||| | ||||| || ||||| || ||||| ||||||||||||||||| Sbjct 358 AGATACAATTGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCTCCAGACCA 417 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| |||| |||||||| || ||| | ||||| | ||| || || || ||||| Sbjct 418 GCAGCGCTTAATATTTGCTGGAAAACAATTAGAGGACGGTCGAACGTTAAGTGATTATAA 477 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || |||||||| || | |||||||| || || | |||||||| Sbjct 478 TATTCAGAAGGAATCGACATTGCATCTAGTTTTACGCTTACGCGGTGG 525 >seq18871 Length=4271 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || |||||| | || || || || || || | || || ||| | Sbjct 2252 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAAACGATAACGTTGGAAGTCGAGGCCTCA 2193 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | || || |||||||| |||||||| || ||||| ||||| ||| Sbjct 2192 GATACAATTGAAAATGTCAAAGCGAAAATTCAAGACAAGGAAGGTATTCCGCCAGATCAG 2133 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| ||||||||||||| || ||||| ||||||| || || || | || |||||| Sbjct 2132 CAGCGTTTAATTTTTGCTGGAAAACAACTTGAGGATGGCCGAACGTTATCTGATTATAAT 2073 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | ||||| ||||||||| | || |||| || || | ||||||||| Sbjct 2072 ATTCAAAAAGAATCCACTTTGCACTTAGTTTTACGCTTACGCGGTGGA 2025 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || | || || || || |||||| | || || |||||| Sbjct 3215 AATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTCATC 3156 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| ||| | ||||| ||||| |||||||| || |||||||| ||||| || Sbjct 3155 TGACACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGATCA 3096 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || || ||||||||||||| || ||| | || || | ||||| || | ||||| || Sbjct 3095 ACAACGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTATCCGACTACAA 3036 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| ||||| ||| | || || ||| | || || || Sbjct 3035 CATCCAAAAGGAATCTACTCTGCATTTGGTATTACGTTTACGTGGCGG 2988 Score = 136 bits (150), Expect = 5e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAA 27492 || || |||||||| ||||| || ||| || |||| |||| ||| | ||||||||| Sbjct 2453 GGTAAAACTATTACACTTGAAGTGGAGCCATCGGATACTATTGAAAACGTCAAGGCTAAA 2394 Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAA 27552 |||||||| ||||| || ||||| || || ||||| || |||||||||||||||| ||| Sbjct 2393 ATTCAGGATAAGGAAGGTATTCCGCCTGATCAGCAACGATTAATTTTTGCTGGTAAACAA 2334 Query 27553 CTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTA 27612 | || |||| || || || | || || ||| | || || ||||| || | ||| || Sbjct 2333 TTGGAAGATGGCCGAACTCTTTCGGATTACAATATACAGAAAGAATCGACGTTGCATTTA 2274 Query 27613 GTCTTGCGTCTTCGCGGTGG 27632 || |||||| | || ||||| Sbjct 2273 GTGTTGCGTTTGCGTGGTGG 2254 Score = 122 bits (134), Expect = 1e-22 Identities = 164/227 (72%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || ||| | || || || ||||| || | || || ||||| Sbjct 2986 ATGCAGATTTTTGTAAAAACGTTAACTGGAAAAACTATAACATTGGAAGTGGAGTCTTCA 2927 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || || || || |||||||| ||||| ||||| ||||| ||| Sbjct 2926 GACACAATTGAAAATGTTAAAGCCAAGATCCAGGACAAAGAGGGTATTCCACCAGATCAG 2867 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| ||||||||||||| || || | ||||| | ||| || || | || || ||| Sbjct 2866 CAGCGGTTAATTTTTGCTGGCAAACAGTTAGAGGACGGTCGCACATTATCTGATTACAAT 2807 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||| ||| || | ||| |||| || ||| | ||||| || Sbjct 2806 ATTCAGAAGG-ATCGACCTTGCATTTAGTATTACGTTTGCGCGGCGG 2761 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || | || || || || || || | || ||||| | Sbjct 2759 ATGCAAATTTTTGTAAAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGAACAATCA 2700 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | || || ||||||||||| || || || ||||| ||||| || Sbjct 2699 GATACCATTGAAAACGTTAAAGCGAAAATTCAGGATAAAGAAGGTATTCCACCAGATCAA 2640 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | ||||| |||||||| || | || |||| || || || | || |||||| Sbjct 2639 CAACGGTTGATTTTCGCTGGTAAACAGTTGGAAGATGGCCGAACTTTATCTGATTATAAT 2580 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || || |||||||| || |||||||| | || || || |||||| Sbjct 2579 ATTCAGAAAGAATCCACCCTCCATCTAGTTCTACGGCTACGAGGTGGA 2532 >seq47143 Length=13737 Score = 136 bits (150), Expect = 5e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || | || || || || ||||| ||||| || ||| || Sbjct 1041 AATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCGAGCCATC 982 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| |||| |||| | || || |||||||| || ||||| || ||||||||||| || Sbjct 981 CGATACGATTGAAAATGTTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGATCA 922 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || || |||| || || || || ||||| || |||| | || | |||||||| Sbjct 921 ACAACGGTTAATATTCGCCGGAAAACAACTAGAAGATGGAAGAACGTTGAATGACTATAA 862 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || || |||||||| | ||| ||||||| ||| | |||||||| Sbjct 861 TATTCAGAAAGAATCCACGTTGCATTTAGTCTTACGTTTACGCGGTGG 814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569633491457360