Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq18871 143 2e-29 seq87437 123 2e-23 seq47143 105 4e-18 >seq18871 Length=4271 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | | ||| || |||||||| ||||| |||||||| ||||| || || || Sbjct 2988 CCGCCACGTAAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAT 3047 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || ||||||| | |||||| || ||||| ||||| || ||||| || ||||| Sbjct 3048 AACGTACGGCCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGA 3107 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | ||| || ||||| ||| ||||| |||||| | ||||||||| ||| || Sbjct 3108 ATTCCTTCTTTGTCCTGGAT-TTTTGCCTTAACGTTTTCAATTGTGTCAGATGACTCGAC 3166 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || ||||||||||| ||||| ||||||||||| || ||||| Sbjct 3167 TTCCAAAGTAATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 Score = 140 bits (154), Expect = 2e-28 Identities = 166/221 (75%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 34487 TAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTC 34546 |||| || || || || || | |||| || |||||||| |||||||| || | |||| Sbjct 2034 TAAG-CGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCAGATAACGTTC 2092 Query 34547 GCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT 34606 | | || ||||||||||| || ||||| ||||||||||| || || ||||| | || | Sbjct 2093 GGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGGAATACCTT 2152 Query 34607 CCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACG 34665 |||||||| ||| ||| | ||| || | |||||| ||| | ||| ||||||| Sbjct 2153 CCTTGTCT-TGAATTTTCGCTTTGACATTTTCAATTGTATCTGAGGCCTCGACTTCCAAC 2211 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||||||| || || ||||| ||||| ||||| ||||| Sbjct 2212 GTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 Score = 132 bits (146), Expect = 3e-26 Identities = 169/229 (74%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | | ||| || || ||||| | || | ||||| ||||| || ||||| || Sbjct 2760 GCCGCCGCGCAAACGTAATACTAAATGCAAGGT-CGATCCTTCTGAATATTGTAATCAGA 2818 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | ||| || |||| || | ||||| || ||||| ||||| ||||| || || || || Sbjct 2819 TAATGTGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGG 2878 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657 | ||||| ||||| |||||| | |||||| | |||||||||| ||||| Sbjct 2879 AATACCCTCTTTGTCCTGGATCTTG-GCTTTAACATTTTCAATTGTGTCTGAAGACTCCA 2937 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| ||||| ||||| || ||||||||||| |||||||||||||| Sbjct 2938 CTTCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 >seq87437 Length=6430 Score = 123 bits (136), Expect = 2e-23 Identities = 147/197 (75%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| ||||| |||||||| | ||||| |||| || | |||||| || |||||| Sbjct 489 TCCTTCTGAATATTATAATCACTTAACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAAT 430 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635 ||||| ||||| ||||| || || | ||| ||||| ||| |||||| | ||||| | Sbjct 429 ATTAAGCGCTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGAATCTTT-GCCTTAACATT 371 Query 34636 AA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 |||||| ||| ||| || || | || || |||||||| |||||||||||||| Sbjct 370 TTCAATTGTATCTGATGACTCGACCTCAAGCGTAATTGTTTTACCAGTTAACGTTTTCAC 311 Query 34695 AAAAATCTGCATGTTGA 34711 ||||||||||| |||| Sbjct 310 GAAAATCTGCATTTTGA 294 >seq47143 Length=13737 Score = 105 bits (116), Expect = 4e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | | ||| || || ||||| | ||| || || ||||| ||||| || Sbjct 812 CGCCACCGCGTAAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCAT 871 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | |||| | ||||| |||||||| ||||| |||||||| || ||||| || || | Sbjct 872 TCAACGTTCTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAG 931 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCC 34656 | | || ||||| ||| ||| ||| | |||||| | ||| || || ||| Sbjct 932 GAATACCTTCCTTATCT-TGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCG 990 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 ||||| | || || |||||||| ||||| |||||||||||||| ||||| |||| Sbjct 991 ACTTCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATTTTGA 1045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314365382416049