Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq18871 152 4e-32 seq47143 140 3e-28 seq73680 111 1e-19 seq73681 82.4 7e-11 >seq18871 Length=4271 Score = 152 bits (168), Expect = 4e-32 Identities = 184/247 (74%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||||||||| | || || || |||| || | |||||||| | || Sbjct 2986 ATGCAGATTTTTGTAAAAACGTTAACTGGAAAAACTATAACATTGGAAGTGGAGTCTTCA 2927 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || || |||||||| || || ||||| ||||| Sbjct 2926 GACACAATTGAAAATGTTAAAGCCAAGATCCAGGACAAAGAGGGTATTCCACCAGATCAG 2867 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| ||||| | || |||||||| || || ||| || || | || |||||||| Sbjct 2866 CAGCGGTTAATTTTTGCTGGCAAACAGTTAGAGGACGGTCGCACATTATCTGATTACAAT 2807 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227 ||||| ||||| |||||||| ||||| || || |||||||| || ||||| ||| | | Sbjct 2806 ATTCAGAAGGA-TCGACCTTGCATTTAGTATTACGTTTGCGCGGCGGCAT-GCAA--ATT 2751 Query 27228 TTTGTAA 27234 ||||||| Sbjct 2750 TTTGTAA 2744 Score = 152 bits (168), Expect = 4e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| |||||| | || || || | |||||| | ||||| || | || Sbjct 3214 ATGCAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTCATCT 3155 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || |||||| || ||||||||||| || || || |||||| Sbjct 3154 GACACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGATCAA 3095 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 || || ||||| | || ||||||||||| |||||| | || |||| ||||| ||||| Sbjct 3094 CAACGATTAATTTTTGCTGGCAAACAATTAGAAGAC-GGCCGTACGTTATCCGACTACAA 3036 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| |||||||| || || | |||||||| || ||||| || || || || Sbjct 3035 CATCCAAAAGGAATCTACTCTGCATTTGGTATTACGTTTACGTGGCGGGAT 2985 Score = 132 bits (146), Expect = 4e-26 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 27022 CTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAG 27081 ||||||| ||||||||||| || || || | ||||| | ||||| |||||||| | Sbjct 2446 CTATTACACTTGAAGTGGAGCCATCGGATACTATTGAAAACGTCAAGGCTAAAATTCAGG 2387 Query 27082 ACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAG 27141 | || ||||| || || || ||||| || || ||||| | || || ||||||||||||| Sbjct 2386 ATAAGGAAGGTATTCCGCCTGATCAGCAACGATTAATTTTTGCTGGTAAACAATTGGAAG 2327 Query 27142 ACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGC 27201 | | || |||| |||||||| || || || || ||||| || ||||| || |||| Sbjct 2326 ATGGCCGAACTCTTTCGGATTACAATATACAGAAAGAATCGACGTTGCATTTAGTGTTGC 2267 Query 27202 GTTTGCGGGGTGGCAT 27217 ||||||| ||||| || Sbjct 2266 GTTTGCGTGGTGGTAT 2251 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || |||| || || | || || | ||||| || | || Sbjct 2252 ATGCAAATTTTCGTGAAGACGTTGACGGGAAAAACGATAACGTTGGAAGTCGAGGCCTCA 2193 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| |||||||||||||| ||||| || || || ||||| Sbjct 2192 GATACAATTGAAAATGTCAAAGCGAAAATTCAAGACAAGGAAGGTATTCCGCCAGATCAG 2133 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 ||||||||||| | || || |||||| | || || | ||| |||| || ||||| || Sbjct 2132 CAGCGTTTAATTTTTGCTGGAAAACAACTTGAGGA-TGGCCGAACGTTATCTGATTATAA 2074 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || || || || ||||| || || || ||||| || Sbjct 2073 TATTCAAAAAGAATCCACTTTGCACTTAGTTTTACGCTTACGCGGTGGAAT 2023 Score = 114 bits (126), Expect = 1e-20 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || |||||| || ||||||||||| | || || || | || || | ||||| |||| Sbjct 2763 CGGCATGCAAATTTTTGTAAAAACATTAACTGGAAAAACAATAACGTTAGAAGTTGAACA 2704 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || || | ||||| | || ||| |||||||| || |||||||| || ||||| || Sbjct 2703 ATCAGATACCATTGAAAACGTTAAAGCGAAAATTCAGGATAAAGAAGGTATTCCACCAGA 2644 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATT 27162 |||||| || || || | ||| || ||||| |||||||| | ||| | || || |||| Sbjct 2643 TCAACAACGGTTGATTTTCGCTGGTAAACAGTTGGAAGA-TGGCCGAACTTTATCTGATT 2585 Query 27163 ACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || ||||| || || || ||| | ||| | ||| | || | || ||||| || Sbjct 2584 ATAATATTCAGAAAGAATCCACCCTCCATCTAGTTCTACGGCTACGAGGTGGAAT 2530 >seq47143 Length=13737 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||| | || || || | ||||| |||||||| || || ||| Sbjct 1040 ATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCGAGCCATCC 981 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||| | || ||| ||||||||||| || ||||| || || || |||||| Sbjct 980 GATACGATTGAAAATGTTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCTCCAGATCAA 921 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 || || ||||||| |||||| |||||| | ||||| | || |||| || || || Sbjct 920 CAACGGTTAATATTCGCCGGAAAACAACTAGAAGA-TGGAAGAACGTTGAATGACTATAA 862 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||| || || || || || ||||| || || ||||| || |||||| Sbjct 861 TATTCAGAAAGAATCCACGTTGCATTTAGTCTTACGTTTACGCGGTGGC 813 >seq73680 Length=8834 Score = 111 bits (122), Expect = 1e-19 Identities = 248/367 (68%), Gaps = 9/367 (2%) Strand=Plus/Plus Query 135296 GAAGAGTGTCTAGTGCGCCGCGAATTGGCGGACAATTTTTGTTATTATAACAAACATTAT 135355 ||||||||| ||||||| || ||| || | || |||| |||||||| || ||||||| Sbjct 7525 GAAGAGTGTATAGTGCGACGTGAACTGTCCGATAATTACTGTTATTACAATGAACATTAC 7584 Query 135356 GATTGCATAGAAGGTGCTCCGGCATGGGCGCAACAAACTTTGCACGCTCACGCCTCTGAT 135415 |||| || || |||||||| | ||||| || | || ||| | | ||| ||| Sbjct 7585 GATTCTATTGATGGTGCTCCAGACTGGGCTCAGAAGACATTGAATGATCATCGGAAGGAT 7644 Query 135416 CGCAGAGACTTTTGTTACACGCGCGAGCAATGGGACCAAGCGTTGACGCATGACCCGTTG 135475 | || | || || || | | |||| || || ||||| || || || Sbjct 7645 AAACGCGAGTATTTGTATACACTTAAACAATTTGAAAGTGCAAAAACGCACGATCCTTTA 7704 Query 135476 TGGAACGCGGCACAACGGCAGCT--TAAGCGAGAAGGCAAAATGCACGGATTTATGCGCA 135533 ||||| | || ||| | || ||| | |||||||| || || || ||||| | Sbjct 7705 TGGAATGGTGCGCAAAATGAACTACTAAAACGG--GGCAAAATACATGGTTTCATGCGAA 7762 Query 135534 TGTATTGGGCAAAAAAGATATTGGAATGGTCTGCA--TCGCCTGCAGAGGCGCTACAACA 135591 |||||||||| ||||| || ||||||||| ||| ||||| | ||| || | || Sbjct 7763 TGTATTGGGCTAAAAAAATTTTGGAATGG--AGCAGTTCGCCCGAAGAAGCTATTAAAAT 7820 Query 135592 CGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGG 135651 ||||| ||||| || ||||| ||||| || ||||| | ||| | ||||| || || || Sbjct 7821 TGCAATTTTTTTAAACGATTATTACAGCTTGGATGGCCATGATCCCAATGGTTATGTTGG 7880 Query 135652 T-TGTAT 135657 | ||||| Sbjct 7881 TATGTAT 7887 >seq73681 Length=5300 Score = 82.4 bits (90), Expect = 7e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 135648 TAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGT 135707 ||||| ||||||||| || || ||| ||||||||||||| ||| | || || ||||| | Sbjct 4660 TAGGTATTATGTGGTCCATCTGTGGTTTACACGATCAAGGCTGGCAAGAACGAAAAGTAT 4719 Query 135708 TTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTAAA 135762 | || || || || | |||||| | || ||| ||| ||| ||||| || |||| Sbjct 4720 TCGGGAAAATCCGATTTATGAATTTTGCCGGATGTCAAAGGAAATTCGATATAAA 4774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434402189914560