Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq18871 116 9e-21 seq47143 100 7e-16 >seq18871 Length=4271 Score = 116 bits (128), Expect = 9e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| || || ||||||||||| || || | | || | || ||||| | || Sbjct 3012 TGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCGTCTTCTAATTGT 3071 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| || || || | |||||||| || || |||| |||||| ||||||||||| ||| Sbjct 3072 TTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTTGTCCTGGATTTTT 3131 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || |||||||| || |||||||| || || || | ||| ||||| || || || Sbjct 3132 GCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATCGTTTTACCAGTT 3191 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 | ||| || ||||| | |||||| Sbjct 3192 AAAGTTTTCACAAATATTTGCATT 3215 Score = 93.3 bits (102), Expect = 1e-13 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | |||||| |||||||| || |||||||| | | || | ||||| || || || Sbjct 2049 GTGCAAAGTGGATTCTTTTTGAATATTATAATCAGATAACGTTCGGCCATCCTCAAGTTG 2108 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || || || || | || || || || || |||| ||||||||||| || || || Sbjct 2109 TTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGGAATACCTTCCTTGTCTTGAATTTT 2168 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||| || ||||| || || || ||| || || || | || ||||| |||||||| Sbjct 2169 CGCTTTGACATTTTCAATTGTATCTGAGGCCTCGACTTCCAACGTTATCGTTTTTCCCGT 2228 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | ||||| || || | ||||| Sbjct 2229 CAACGTCTTCACGAAAATTTGCAT 2252 >seq47143 Length=13737 Score = 100 bits (110), Expect = 7e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 ||||| ||||| || || ||||| || | || ||||||||||| || || || || Sbjct 844 GTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTTCCATCTTCTAGTTGTTTTCCG 903 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| || | |||||||| || ||||||| |||||||| || || || || ||| Sbjct 904 GCGAATATTAACCGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGAATTTTCGCTTTA 963 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| || || || || || || || || || || || || || || | ||| Sbjct 964 ACATTTTCAATCGTATCGGATGGCTCGACTTCAAGCGTAATGGTTTTACCAGTTAAAGTT 1023 Query 211098 TTTACAAACACCTGCATTTT 211117 || ||||| | |||||||| Sbjct 1024 TTCACAAAAATTTGCATTTT 1043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157741792701845