Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq18871 141 2e-28 seq47143 125 2e-23 seq88940 116 9e-21 seq50715 102 2e-16 seq61181 95.1 3e-14 >seq18871 Length=4271 Score = 141 bits (156), Expect = 2e-28 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | ||||||||||||||| | ||| ||||| | || |||| ||||| || || || Sbjct 2049 GTGCAAAGTGGATTCTTTTTGAATATTATAATCAGATAACGTTCGGCCATCCTCAAGTTG 2108 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 || ||||| || || | || || || || ||||||||||||||||||||||| || || Sbjct 2109 TTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGGAATACCTTCCTTGTCTTGAAT-TT 2167 Query 225630 TTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCG 225688 | || || ||| ||| || || ||||||| || || || ||||| ||||| || |||| Sbjct 2168 TCGCTTTGACATTTTCAATTGTATCTGAGGCCTCGACTTCCAACGTTATCGTTTTTCCCG 2227 Query 225689 TCAAAGTTTTTATGAACACTTGCAT 225713 |||| || || | ||| | |||||| Sbjct 2228 TCAACGTCTTCACGAAAATTTGCAT 2252 Score = 138 bits (152), Expect = 3e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || ||||| ||||||||||| || | ||| ||||| | ||||||| |||||| Sbjct 2548 AGAACTAGATGGAGGGTGGATTCTTTCTGAATATTATAATCAGATAAAGTTCGGCCATCT 2607 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | ||| || |||||||| || | |||||||| || || ||||||||||| || || Sbjct 2608 TCCAACTGTTTACCAGCGAAAATCAACCGTTGTTGATCTGGTGGAATACCTTCTTTATCC 2667 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 || || ||| || || || ||| ||||| ||||| ||| || |||||||| || || Sbjct 2668 TGAAT-TTTCGCTTTAACGTTTTCAATGGTATCTGATTGTTCAACTTCTAACGTTATTGT 2726 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || ||||||| || | |||||| Sbjct 2727 TTTTCCAGTTAATGTTTTTACAAAAATTTGCAT 2759 Score = 91.5 bits (100), Expect = 4e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || |||||||| || | ||||||||| | | ||||| |||||||| | || || ||| Sbjct 2284 GTCGATTCTTTCTGTATATTGTAATCCGAAAGAGTTCGGCCATCTTCCAATTGTTTACCA 2343 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 || || || | |||||| || || ||||||||||||||||| || || || || ||| Sbjct 2344 GCAAAAATTAATCGTTGCTGATCAGGCGGAATACCTTCCTTATCCTGAATTTTAGCCTTG 2403 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCC 225686 || ||| || || || || | ||||| || | || || || || || Sbjct 2404 ACGTTTTCAATAGTATCCGATGGCTCCACTTCAAGTGTAATAGTTTTACC 2453 >seq47143 Length=13737 Score = 125 bits (138), Expect = 2e-23 Identities = 150/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 ||||||||||| || | ||| || || ||| ||||| ||||||||||| || || || Sbjct 844 GTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTTCCATCTTCTAGTTGTTTTCCG 903 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 ||||| || | |||||||| || || |||||||||||||| ||||| || ||| || || Sbjct 904 GCGAATATTAACCGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGAAT-TTTCGCTTT 962 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||| || || || || | || || || | ||| || || || || || ||||| Sbjct 963 AACATTTTCAATCGTATCGGATGGCTCGACTTCAAGCGTAATGGTTTTACCAGTTAAAGT 1022 Query 225696 TTTTATGAACACTTGCATTTT 225716 ||| | || | ||||||||| Sbjct 1023 TTTCACAAAAATTTGCATTTT 1043 >seq88940 Length=3822 Score = 116 bits (128), Expect = 9e-21 Identities = 113/143 (79%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784 || || ||| ||||||| || || ||||| ||| ||||||||||||| |||||||||| Sbjct 2077 ATGTCAAGGAGTGGTAAGGTTTTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCT 2136 Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA 7844 | | | |||||| || ||||||||||||| |||||| |||||| | |||| ||| Sbjct 2137 TGTGCGGGTCCCCGTCAATTCCTTTGAGTTTTAATCTTGCGACCGTAGTCCCCAGGCGGA 2196 Query 7845 ATATTT-ACGCGTTAGCT-TAAT 7865 || ||| ||||||||||| |||| Sbjct 2197 ATGTTTAACGCGTTAGCTGTAAT 2219 Score = 98.7 bits (108), Expect = 2e-15 Identities = 87/105 (83%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825 |||||| ||||||||||||| ||| ||||| | |||| ||| | || ||| | ||||| Sbjct 2750 TGAGAGGATGATCAGCCACACTGGAACTGAGATACGGTCCA-GACTCCTACGGGAGGCAG 2692 Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870 |||||| ||||||| |||||||||||||||| ||||| ||| ||| Sbjct 2691 CAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGTCATG 2647 >seq50715 Length=1094 Score = 102 bits (112), Expect = 2e-16 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||| |||||||||||||||| |||||| | | ||| || || ||||| ||| Sbjct 778 TTCAGGATGGCCAAAAAATCAGAATAGGTGTTGAAATAAGATTGGGTCTCCTCCACCTAT 837 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||||||||| |||||||||||||| | |||||| || Sbjct 838 AGGATCAAAAAATCTAGTATTAAAATTACGATCAGTCAA 876 >seq61181 Length=9990 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/109 (80%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 372598 TAAGCTGCTATAAG-CAATTACTTATAGGTGTAACAGAATAGAGGGTAGCGACTGTTTAC 372656 ||| ||||| | || ||| || | |||||| ||| ||||| | ||||||||||||||| Sbjct 6751 TAACCTGCTTTTAGGCAACTATTAGTAGGTGGCACAAAATAGGGAGTAGCGACTGTTTAC 6692 Query 372657 TAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATAGGGTCTGAC 372705 |||||||||||||||| || || |||| || |||||||||||||| Sbjct 6691 TAAAAACACAGGACTCTGCAAACACGTAAGTGGAAGTATAGGGTCTGAC 6643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191080384057382