Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq27572 111 2e-19 seq54457 109 8e-19 seq41170 109 8e-19 seq5310 86.0 9e-12 >seq27572 Length=212 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 77398 CACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTT 77457 ||||||| |||||||| ||||| ||||| | ||||| ||||||| || || | || Sbjct 1 CACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGCTGGTTCAACAATT 60 Query 77458 GTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAA 77517 ||||| | || ||| ||||||| | | | ||| ||||||||||| || || | Sbjct 61 TCGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGA 120 Query 77518 CTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAAT 77577 ||| || ||||| || | ||||| || || || || | |||||| | ||| |||| Sbjct 121 TTCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAAT 180 Query 77578 AATTAATGTCTATAATTTTATTGAGATTT 77606 |||| ||| ||||||||||| |||||| Sbjct 181 AATTGCGGTCGATAATTTTATTCAGATTT 209 >seq54457 Length=626 Score = 109 bits (120), Expect = 8e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 77398 CACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTT 77457 ||||||| |||||||| ||||| ||||| | ||||| ||||||| | || | || Sbjct 228 CACAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGTTGGTTCAACAATT 287 Query 77458 GTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAA 77517 ||||| | || ||| ||||||| | | | ||| ||||||||||| || || | Sbjct 288 TCGCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGA 347 Query 77518 CTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAAT 77577 ||| || ||||| || | ||||| || || || || | |||||| | ||| |||| Sbjct 348 TTCCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAAT 407 Query 77578 AATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTT 77632 |||| ||| ||||||||||| |||||| | | || | |||| | || || || Sbjct 408 AATTGCGGTCGATAATTTTATTCAGATTTTTCGCCACAAATTTAGCAACCTCTTT 462 >seq41170 Length=8096 Score = 109 bits (120), Expect = 8e-19 Identities = 183/262 (70%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 77916 TATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCAC 77975 || ||| ||| |||| || |||||| |||| ||| || || || | | | |||||| Sbjct 6381 TAAAGCGCTTCGAATTTTTCACCCCAACACTCATTCAAGCCGGGACACTGACTAGGGCAC 6322 Query 77976 ATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGA 78035 ||||| |||||||||||| || | ||| || ||||| || | ||| |||||||||| Sbjct 6321 ATCAAGCTCCAGTCACCATCGTCATCAACACGCTTCATGAACAAATCTGGTATCCATAAG 6262 Query 78036 GCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTT-TTTAAGATCGAG 78094 || | || || || || | || ||| | || |||||| |||| | ||| Sbjct 6261 GCCAAGAAAAGGTCGCGACAACGCATTTGTTCGTCGCCGTCATTCTTCCGTAAG-TTGAG 6203 Query 78095 AAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTT 78154 ||| || | ||| || | ||||||||| |||| ||| || || ||| ||||||| | | Sbjct 6202 AAATTCGAAAATTTCCGCATGCCATGGCTCTAAATAAATGGCTATAGAACCAGGTCTTCT 6143 Query 78155 ATTACCTCCCTGATCTATATAT 78176 ||||| || ||||| | |||| Sbjct 6142 GTTACCGCCTTGATCCACATAT 6121 >seq5310 Length=1504 Score = 86.0 bits (94), Expect = 9e-12 Identities = 237/356 (67%), Gaps = 7/356 (2%) Strand=Plus/Plus Query 48122 CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAA 48181 |||||| | | | | || || ||||| | |||||| |||||| || | || | Sbjct 417 CAAATGATGATAGAGTAGGCACGCAAACTGACAATGGTAACCTTCGTCACGCGATATAAG 476 Query 48182 TTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGC 48241 ||| || ||| | | || ||||||| | |||||||||||||| ||||| || || Sbjct 477 TTCATTGCTAAAAGACAAGCCAGGCATTAAGCGTCGTTTTTTGAGCCAGAATATAGCGGC 536 Query 48242 GAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA 48301 ||| ||| || ||||| |||||||| || |||||||| || | || | || ||| | Sbjct 537 AAAACTTCCGGAGAAGAAAATGCCTTCGACAGCCGCAAAAGCAATCAGCCGTTCACCGAA 596 Query 48302 ACTGGC-TTC-GTTGTG-TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGG 48358 | || ||| | | || ||||| | |||||||| || ||||| || ||||| || Sbjct 597 TGTTGCATTCTGATTTGAAATCCATTTTAAGGCCCAATCGGCTTTCTTTTTAACACATGG 656 Query 48359 CATTGTTTCTATAGCATTAAAGAGAAAGtttttttCAT-TGCTATCTTTAACGTAA-GTA 48416 || || || ||||| || || || | ||| | || || | | ||| | Sbjct 657 AATCGTAGTGATTGCATTGAAAAGGAAATCACGTTCTTCTGGATTCGTGA--TTAACGAC 714 Query 48417 TCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCC 48472 | ||||||| || |||||||| | ||||| ||| ||| ||||||||||| Sbjct 715 TGGATTAAAATACCGTACATTTCCGCATGAATCGATTCTATTTGAATCTGAAATCC 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693844288917920