Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5310 118 2e-21 seq54457 105 1e-17 seq27572 89.7 7e-13 >seq5310 Length=1504 Score = 118 bits (130), Expect = 2e-21 Identities = 383/585 (65%), Gaps = 10/585 (2%) Strand=Plus/Plus Query 46398 TTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATT-CTGAAA 46456 || |||||| | ||||||||| | | ||| ||| |||| || | || || | | | Sbjct 204 TTGCATAAATTTAAACGGATTTGAAGCATGATACATTTGAGTACAATTTAGTTGCAGCAG 263 Query 46457 TCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGA 46516 | |||| ||| ||||||||||| ||||| || ||| | |||| ||| || || | Sbjct 264 T-AGTCGATCGGCAACGAATTCAATATAAGTAGCCATTTTGTCACTCGACATACCGATCA 322 Query 46517 GTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATC-CGATATT 46575 | |||| || || || || || || |||| ||| | |||||| || ||| | Sbjct 323 GAGTGACAGGAAGCGCATCACACAGGAATTCTTTTTCGAGCTGGACAGCTTCACGAAAG- 381 Query 46576 ATCGATGTTACTG-TTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGC 46634 ||| | ||| | |||| ||| ||| || ||||||| | | | | || || || Sbjct 382 ATCT-TCTTAATAATTTCTTCAGAAGGTTTCTGGTTCAAATGATGATAGAGTAGGCACGC 440 Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694 ||| | |||||| ||||| || | || | ||| || ||| | | ||||| Sbjct 441 AAACTGACAATGGTAACCTTCGTCACGCGATATAAGTTCATTGCTAAAAGACAAGCCAGG 500 Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754 ||||| | || ||||||||||| |||||||| || ||| ||| || ||||| ||||| Sbjct 501 CATTAAGCGTCGTTTTTTGAGCCAGAATATAGCGGCAAAACTTCCGGAGAAGAAAATGCC 560 Query 46755 TTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCA---TCATTATGAATCCA 46811 ||| |||||||| || || | || | || ||| | | ||| | ||| |||||| Sbjct 561 TTCGACAGCCGCAAAAGCAATCAGCCGTTCACCGAATGTTGCATTCTGATTTGAAATCCA 620 Query 46812 CCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871 || |||||||| || || || || ||||| || || || || ||||| || || Sbjct 621 TTTTAAGGCCCAATCGGCTTTCTTTTTAACACATGGAATCGTAGTGATTGCATTGAAAAG 680 Query 46872 AAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGA 46931 || | ||| || || | | | | | ||||||| || |||||||| | Sbjct 681 GAAATCACGTTCTTCTGGATTCGTGATTAACGACTGGATTAAAATACCGTACATTTCCGC 740 Query 46932 ATGAATGTTTTCAATAGCCATCTGAAATCC-GTAAAAACATCTTG 46975 |||||| ||| || ||||||||||| | || || || ||| Sbjct 741 ATGAATCGATTCTATTTGAATCTGAAATCCTGAAATAAAATTTTG 785 >seq54457 Length=626 Score = 105 bits (116), Expect = 1e-17 Identities = 244/364 (67%), Gaps = 14/364 (4%) Strand=Plus/Plus Query 75995 CAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGC 76054 ||||| || || || || || ||||| | ||||| ||||||| | || | || | Sbjct 230 CAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGTTGGTTCAACAATTTC 289 Query 76055 GCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACT 76114 ||||| || ||| | ||||| | | | ||| |||||||||| || || | | Sbjct 290 GCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGATT 349 Query 76115 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAA 76174 || || ||||| || | ||||| || || || ||| | |||||| | |||||||||| Sbjct 350 CCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAATAA 409 Query 76175 TTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTT-TAGTTT 76233 || || ||||||||||| |||||| | | || | |||| | || || || | | | Sbjct 410 TTGCGGTCGATAATTTTATTCAGATTTTTCGCCACAAATTTAGCAACCTCTTTCAAATGT 469 Query 76234 GAGAAAATCAAATTTTCCATC------TATCACAAACATATTAAGAGCTATAGATGCTAG 76287 | ||||| || |||| | || | ||||| |||| | ||| || ||||||| Sbjct 470 GTGAAAA-CATATTTGCGCTCAGAACGATTTACAAATTTATTGACAGCAATTGATGCTAA 528 Query 76288 ATTACAAACGGCTACCTCATTAGCATTGG---CATATTGTATTATCTCCGTGCATAGATT 76344 || |||||||| | ||||| | |||| | | || | ||||| ||||||| || Sbjct 529 GTTGCAAACGGCGATCTCAT---CCTTGGAACAAAACTGAACAATCTCTGTGCATAAGTT 585 Query 76345 ACTA 76348 |||| Sbjct 586 ACTA 589 >seq27572 Length=212 Score = 89.7 bits (98), Expect = 7e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 75995 CAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGC 76054 ||||| || || || || || ||||| | ||||| ||||||| || || | || | Sbjct 3 CAACTGGCTTCCAAAGCTCCATAATACAACGTTTCAAAAATCTGCTGGTTCAACAATTTC 62 Query 76055 GCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACT 76114 ||||| || ||| | ||||| | | | ||| |||||||||| || || | | Sbjct 63 GCTTCCTTGCTTTCATACGGATATTTCATCAATGCAAACGCATCTGCTAAGCCTTGGATT 122 Query 76115 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAA 76174 || || ||||| || | ||||| || || || ||| | |||||| | |||||||||| Sbjct 123 CCGATTCCAATTGGACGATGTCGTTTGTTTGACCGTTCCGTTTCTGGTAGAGGGTAATAA 182 Query 76175 TTAATATCTATAATTTTATTGAGATTT 76201 || || ||||||||||| |||||| Sbjct 183 TTGCGGTCGATAATTTTATTCAGATTT 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712088209248960