Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_031271.1 Length=43602 Score E Sequences producing significant alignments: (Bits) Value seq56214 87.8 5e-13 >seq56214 Length=539 Score = 87.8 bits (96), Expect = 5e-13 Identities = 195/293 (67%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 40716 AAGACATGGCAAGGTTCTGTCGGTGCAGGTACGTCTCGTAACTATAACCTTCAGTTCCGT 40775 ||||||||||| || | || || | || || || || ||||| ||||| || ||| Sbjct 504 AAGACATGGCAGGGAACCGTAGGCTCCACAACATCACGAAATTATAATCTTCAATTTCGT 445 Query 40776 GATTCCGTTGCACTGTCTCCAGTGTGGGATGGCTTTGACTTAGGTTCAGACCCAGGAATG 40835 |||||||| | ||| || || |||||||| || || ||||| |||| | | ||| Sbjct 444 GATTCCGTAGTTTTGTACCCGGTATGGGATGGATTCGATTTAGGCGCAGATACCGACATG 385 Query 40836 GCACCAGAAGAAGATAGACCAGGAGACTTACCTGTGTCTCAATACCCCATGCATCAGTTA 40895 || |||| ||||| || || || | ||||| || || ||||| | ||| | | Sbjct 384 AATCCGGAAGCGGATAGGCCTGGGGATTACCCTGTATCCCAGTACCCAGTACATATGCTC 325 Query 40896 CCTAATAACCACATGGTTGATAACATCCTTGTTATGAACTCATTAGGTGTAGGTTTAGGT 40955 || ||||| || | || || | |||||| || | || |||||||| ||| Sbjct 324 CCGTTAAACCATTTGATAGACAATCTATTTGTTAGAGGTTCGCTGGGGGTAGGTTTCGGT 265 Query 40956 ATGGATGGTAGAGGTGGTTATGTGTCGAATGTTACCGTGCAGGATTGTGCAGG 41008 ||||| || |||| ||||| || || | ||||| | ||||| || || Sbjct 264 ATGGACGGGCAAGGTCTGTATGTCTCTAACATAACCGTCGAAGATTGCGCTGG 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139247611765304