Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq18871 105 2e-17 seq47143 100 7e-16 seq87437 95.1 3e-14 >seq18871 Length=4271 Score = 105 bits (116), Expect = 2e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 ||| || |||||||| || || ||||| | ||| |||| ||||| || || ||| || Sbjct 2055 AGTGGATTCTTTTTGAATATTATAATCAGATAACGTTCGGCCATCCTCAAGTTGTTTTCC 2114 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 || || || | | |||||| || | || || |||||||| ||||||||||| ||| Sbjct 2115 AGCAAAAATTAAACGCTGCTGATCTGGCGGAATACCTTCCTTGTCTTGAATTTTCGCTTT 2174 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 |||| | || | | ||||| ||| ||||| | || || ||||| ||||| | || Sbjct 2175 GACATTTTCAATTGTATCTGAGGCCTCGACTTCCAACGTTATCGTTTTTCCCGTCAACGT 2234 Query 152087 CTTCACGAAGACCTGCAT 152104 ||||||||| | ||||| Sbjct 2235 CTTCACGAAAATTTGCAT 2252 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| |||||||| || |||||||||||||| |||| ||| || | || ||||||| Sbjct 3011 ATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGATAACGTACGGCCGTCTTCTAATTG 3070 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 ||| || || || || | | || || || | || |||||||| || || || ||||| Sbjct 3071 TTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGAATTCCTTCTTTGTCCTGGATTTT 3130 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 | || || | || | |||| || ||| ||||| | |||||| ||||| || || Sbjct 3131 TGCCTTAACGTTTTCAATTGTGTCAGATGACTCGACTTCCAAAGTAATCGTTTTACCAGT 3190 Query 152081 GAGAGTCTTCACGAAGACCTGCATT 152105 | ||| ||||| || | |||||| Sbjct 3191 TAAAGTTTTCACAAATATTTGCATT 3215 >seq47143 Length=13737 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||| | ||| | || || ||||| || || || || || || ||||| |||||||| Sbjct 831 GACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCATTCAACGTTCTTCCATCTTC 890 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||| ||| |||||||| || | || || || || | | || |||||||| ||||| Sbjct 891 TAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAGGAATACCTTCCTTATCTTG 950 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 |||||| ||| ||| | || | | || || ||| |||||||| ||||| ||||| Sbjct 951 AATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCGACTTCAAGCGTAATGGTTTT 1010 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || | ||| ||||| || | |||||||| Sbjct 1011 ACCAGTTAAAGTTTTCACAAAAATTTGCATTTT 1043 >seq87437 Length=6430 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| | || || || || || || || ||||| ||| |||| || || ||| Sbjct 507 ACTAGATGCAATGTCGATTCCTTCTGAATATTATAATCACTTAACGTTCGACCGTCCTCT 448 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 | ||| || || || || | | ||||||||| | | ||||||||||| |||||| Sbjct 447 AATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGA 388 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || ||| || ||| | || | | ||||| ||| || ||||| ||||| ||||| Sbjct 387 ATCTTTGCCTTAACATTTTCAATTGTATCTGATGACTCGACCTCAAGCGTAATTGTTTTA 328 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || | || |||||||| | ||||||||| Sbjct 327 CCAGTTAACGTTTTCACGAAAATCTGCATTTT 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152417078561463