Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq5642 120 4e-22 seq64532 102 1e-16 >seq5642 Length=9115 Score = 120 bits (132), Expect = 4e-22 Identities = 357/553 (65%), Gaps = 16/553 (3%) Strand=Plus/Plus Query 155876 AATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCC 155935 ||| || | ||| || ||||| || |||||||||||||| || | | || || || || Sbjct 7583 AATCTGCAAACGTCCTTTTTCGTCCGGTAATCCAATTTCCATTTGTACCTCAAAACGACC 7642 Query 155936 AGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAAT 155995 |||| | || ||||| ||||| | || | || ||||| ||||| || |||| Sbjct 7643 GGGTCGCAGCAAAGCTTCATCAATCATATCTTTGCGATTTGTCATGCCTATTATCAAAAC 7702 Query 155996 GTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTACGGCGTCGTG 156055 ||| ||||| ||| ||||| || ||||| || | || ||||| || |||| ||||| Sbjct 7703 GTTATTTAATTGTTCAACACCATCGATTTTCGAAAGCAACTGATTAACAACGGTATCGTG 7762 Query 156056 CGTGGC-GT--TATC---------ACCGCGTTTTTTACACAGAGCATCTATTTCATCGAA 156103 | || || | ||| | | || || | ||||| |||||||| || Sbjct 7763 GACACCAGTACTACCAGTAGCTGAACCTCTTGACTTGCAAATCGCATCGATTTCATCAAA 7822 Query 156104 GACGATAACGTGTAATCCGCTGGCTAAACCCAATTTNNNNNNNNNNNNNNNAGCCTCTTG 156163 | ||||| ||| ||||| || ||||| ||| ||| ||| Sbjct 7823 AATGATAATGTGCAATCCACTATAGGGACCCAGTTTCTTCTCTTCTTCCTCAGCATCTGC 7882 Query 156164 AAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACC 156223 |||||| || | | || || ||||| ||||| |||||||| | || | | ||| || Sbjct 7883 AAACAAGCGCCGTATATTCGCCTCCGACTCACCAACATATTTATCCAAAATCTGAGGGCC 7942 Query 156224 GTTAACTATTTTGACGGGTCGTGATTTAAAAGCTTGA--GCGATACAGCGAGCCATTAAT 156281 ||| || ||||| || |||| || || | ||| |||| |||||||| || Sbjct 7943 GTTTACGATTTTCGGTGGCCGTGCATTCAA--CATGACTCCGATCTGACGAGCCATCAAA 8000 Query 156282 GTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAAT 156341 ||||| || || || || ||||||| || | ||||| | ||| ||||||||| Sbjct 8001 GTTTTTCCCGTTCCGGGCGGCCCGTATAGTAAAATACCTTTGACATGACGGCAACCTAAT 8060 Query 156342 TTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAGAA 156401 | |||| |||||| ||| | |||||| ||||| || | || || || | Sbjct 8061 TGTTCAACTATTTCAGGCGGGAAAACTCTGGATGCAAAAGCACGTCTGAATATCTCATTG 8120 Query 156402 AATTCTTTATCCA 156414 |||| |||||||| Sbjct 8121 AATTGTTTATCCA 8133 >seq64532 Length=2006 Score = 102 bits (112), Expect = 1e-16 Identities = 232/342 (68%), Gaps = 18/342 (5%) Strand=Plus/Plus Query 50474 AGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACA-TAA 50532 ||| |||||||| ||| |||| || ||||||||||| || ||||| || || | Sbjct 1039 AGGTGATTTAGGCCCTATTTATGGATTTCAATGGAGGCACTTTGGCGCCAAGTATTGTGG 1098 Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592 | ||||| | |||||| || | |||| | |||||| | ||||| |||| || Sbjct 1099 AATGCGA-GAAAATTATGATAATAAAGGAATTGATCAATTACAAAATGTTATTGATACCA 1157 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 | || | || || | ||| | | || ||||| | ||||||||||| ||| || Sbjct 1158 TTAAGAATAATCCAAATGATAGAAGGATAATAATGTCAGCCTGGAATCC----GATGCAG 1213 Query 50653 ATC----AAACCGTTTTACCTCCGTGTCAT-GTTTTATGTCAATTTTATGCCACAGACAA 50707 | ||| | | ||||| || ||| | || || || ||||||| || || Sbjct 1214 TTGCCAGAAATGGCGCTTCCTCCATGCCATTGCTTGGTG-CAGTTTTATGT---AGCTAA 1269 Query 50708 TGT---TTTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTT 50764 || |||||| ||||||| |||||| | || ||||| ||||| ||||| |||||||| Sbjct 1270 TGGATATTTATCGTGTCAATTGTATCAACGTTCCGCTGACATGGGCTTAGGAGTTCCTTT 1329 Query 50765 CAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806 ||| | || |||||||||||||| ||| || | ||||| Sbjct 1330 CAATATTGCAAGCTACGCTTTATTAACTTATATGGTAGCTCA 1371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666283440106680