Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq18871 120 7e-22 seq87437 118 3e-21 seq47143 116 9e-21 >seq18871 Length=4271 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| || | || ||||||||||| || | || || || |||||| Sbjct 2249 CAAATTTTCGTGAAGACGTTGACGGGAAAAACGATAACGTTGGAAGTCGAGGCCTCAGAT 2190 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| || ||||| ||||| ||||| || || || || ||||| Sbjct 2189 ACAATTGAAAATGTCAAAGCGAAAATTCAAGACAAGGAAGGTATTCCGCCAGATCAGCAG 2130 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || |||||||| || || ||||| | || | | |||||||| | Sbjct 2129 CGTTTAATTTTTGCTGGAAAACAACTTGAGGATGGCCGAACGTTATCTGATTATAATATT 2070 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || |||| | ||||| Sbjct 2069 CAAAAAGAATCCACTTTGCACTTAGTTTT 2041 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || ||||||||| | || || |||||||| || | || || || || ||| Sbjct 3211 CAAATATTTGTGAAAACTTTAACTGGTAAAACGATTACTTTGGAAGTCGAGTCATCTGAC 3152 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || ||| || ||||||||||||||||| || || || || ||| Sbjct 3151 ACAATTGAAAACGTTAAGGCAAAAATCCAGGACAAAGAAGGAATTCCGCCAGATCAACAA 3092 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || || || || ||||| | ||||| || | || | |||| || ||| || Sbjct 3091 CGATTAATTTTTGCTGGCAAACAATTAGAAGACGGCCGTACGTTATCCGACTACAACATC 3032 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| ||||| || |||||| | || || Sbjct 3031 CAAAAGGAATCTACTCTGCATTTGGTATT 3003 >seq87437 Length=6430 Score = 118 bits (130), Expect = 3e-21 Identities = 159/221 (72%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 177912 GTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTG 177971 || ||||||| | |||||||||||||| | || || ||||| || || || ||||| Sbjct 293 GTCAAAATGC---AGATTTTCGTGAAAACGTTAACTGGTAAAACAATTACGCTTGAGGTC 349 Query 177972 GAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCT 178031 || ||||| || || || || || || ||||||||| || || |||||||| ||| Sbjct 350 GAGTCATCAGATACAATTGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCT 409 Query 178032 CCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC 178091 || |||||||| || | || || || |||||||| | || || || | || | Sbjct 410 CCAGACCAGCAGCGCTTAATATTTGCTGGAAAACAATTAGAGGACGGTCGAACGTTAAGT 469 Query 178092 GATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTT 178132 |||||||| | || || ||||| ||| ||||||| ||||| Sbjct 470 GATTATAATATTCAGAAGGAATCGACATTGCATCTAGTTTT 510 >seq47143 Length=13737 Score = 116 bits (128), Expect = 9e-21 Identities = 157/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| ||||||| ||||||||| | || || ||||| || || || || || || Sbjct 1043 AAAATGC---AAATTTTTGTGAAAACTTTAACTGGTAAAACCATTACGCTTGAAGTCGAG 987 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || || || || || || ||| || ||||| || || ||||| || ||||| Sbjct 986 CCATCCGATACGATTGAAAATGTTAAAGCGAAAATTCAAGATAAGGAAGGTATTCCTCCA 927 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || ||||| | || |||||||||||||| || ||||||||||| || | || Sbjct 926 GATCAACAACGGTTAATATTCGCCGGAAAACAACTAGAAGATGGAAGAACGTTGAATGAC 867 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| | || |||||||| || ||||| | || || Sbjct 866 TATAATATTCAGAAAGAATCCACGTTGCATTTAGTCTT 829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202266758301882