Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq18871 105 6e-18 seq87437 100 3e-16 seq47143 84.2 2e-11 >seq18871 Length=4271 Score = 105 bits (116), Expect = 6e-18 Identities = 163/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| | |||||| || | ||||| || | ||||||||||| || || || || Sbjct 2760 GCCGCCGCGCAAACGTAATACTAAATGCAAGGT-CGATCCTTCTGAATATTGTAATCAGA 2818 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||||| |||| || | ||| ||||| || || || | ||||| || || | || Sbjct 2819 TAATGTGCGACCGTCCTCTAACTGTTTGCCAGCAAAAATTAACCGCTGCTGATCTGGTGG 2878 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGACTCCA 41813 || | ||| |||||| ||| || |||| ||| || ||||| ||||||| Sbjct 2879 AATACCCTCTTTGTCCTGGATCTTG-GCTTTAACATTTTCAATTGTGTCTGAAGACTCCA 2937 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| ||||| ||||| || || | ||| ||||| ||||||||||| Sbjct 2938 CTTCCAATGTTATAGTTTTTCCAGTTAACGTTTTTACAAAAATCTGCAT 2986 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| |||| |||||| |||| |||||| || ||||| || ||||| |||||||| Sbjct 2988 CCGCCACGTAAACGTAATACCAAATGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAT 3047 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || |||| || | || ||||| || || || | || ||||| || | ||| Sbjct 3048 AACGTACGGCCGTCTTCTAATTGTTTGCCAGCAAAAATTAATCGTTGTTGATCTGGCGGA 3107 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGACTCCAC 41814 | | || |||||| ||||||| ||| |||| || ||||| ||||| || Sbjct 3108 ATTCCTTCTTTGTCCTGGATTTTTGCCTT-AACGTTTTCAATTGTGTCAGATGACTCGAC 3166 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || ||||||||||| || | || || || || || ||||| Sbjct 3167 TTCCAAAGTAATCGTTTTACCAGTTAAAGTTTTCACAAATATTTGCAT 3214 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||||| ||||| || | |||| ||| || || ||||| ||||| || || Sbjct 2026 CCACCGCGTAAGCGTAAAACTAAGTGCAAAGTGGATTCTTTTTGAATATTATAATCAGAT 2085 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || || || || || || || || | ||||| || || | ||| Sbjct 2086 AACGTTCGGCCATCCTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGGA 2145 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTC--GACTCCA 41813 | | |||||||| ||| |||| |||| || || | ||| || | ||| | Sbjct 2146 ATACCTTCCTTGTCT-TGAATTTTCGCTTTGACATTTTCA-ATTGTATCTGAGGCCTCGA 2203 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| |||||||||||| ||||||| |||||| |||||||| ||||| Sbjct 2204 CTTCCAACGTTATCGTTTTTCCCGTCAACGTCTTCACGAAAATTTGCAT 2252 >seq87437 Length=6430 Score = 100 bits (110), Expect = 3e-16 Identities = 170/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||||| ||||| || ||||||| || ||||||||||| ||||| || Sbjct 527 CGCCACCGCGTAAGCGTAAAACTAGATGCAATGTCGATTCCTTCTGAATATTATAATCAC 468 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 | || || |||| || | || || || || ||||| | |||||| ||||| | | Sbjct 467 TTAACGTTCGACCGTCCTCTAATTGTTTTCCAGCAAATATTAAGCGCTGCTGGTCTGGAG 408 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCT--CGACTC 41811 ||| | ||||| | | ||| | ||||| | ||| || | ||| || ||||| Sbjct 407 GAATTCCTTCCTTAT-CTTGAATCTTTGCCTTAACATTTTCA-ATTGTATCTGATGACTC 350 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATCGAT 41871 ||||| | ||| || |||||||| || | ||| || |||||||||||||| || | || Sbjct 349 GACCTCAAGCGTAATTGTTTTACCAGTTAACGTTTTCACGAAAATCTGCATTTTGACAAT 290 Query 41872 GGA 41874 ||| Sbjct 289 GGA 287 >seq47143 Length=13737 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||||| |||||| || | ||||| |||| || |||||||| |||||||| Sbjct 812 CGCCACCGCGTAAACGTAAGACTAAATGCAACGTGGATTCTTTCTGAATATTATAGTCAT 871 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 | || | | || || || || || ||||||||||| | || ||||| || | | Sbjct 872 TCAACGTTCTTCCATCTTCTAGTTGTTTTCCGGCGAATATTAACCGTTGTTGATCTGGAG 931 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 ||| | ||||| | | ||| |||| |||| ||| | | || ||| | ||| Sbjct 932 GAATACCTTCCTTAT-CTTGAATTTTCGCTTTAACATTTTCAATCGTATCGGATGGCTCG 990 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || | ||| || |||||||| || | || || || ||||| ||||| || Sbjct 991 ACTTCAAGCGTAATGGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATTTT 1043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461755285603600