Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq76348 107 2e-18 seq81429 86.0 6e-12 >seq76348 Length=48548 Score = 107 bits (118), Expect = 2e-18 Identities = 164/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || ||||| ||||| | ||| ||| || ||||| || ||||| ||||| || ||| Sbjct 25140 TCATCTCTACTGATTAATTCATTGCTGAATGTTAATCCAGGCATCAGTCCTCTCTTTTTT 25081 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCG 16345 ||||||||||| || |||||||| || ||||| ||||| || ||||||| ||||| || Sbjct 25080 AACCAGAATATTGCTGCAAATGAACCAGAAAAAAATATTCCTTCAACAGCAGCAAATGCT 25021 Query 16346 ATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCT 16405 | | ||||| | | || | | | || | |||||| || | |||| || ||| Sbjct 25020 ACAACACGTTCACCAAATGTGGAAGTTGAATCATTAATCCAATTTATTGCCCAATCAGCT 24961 Query 16406 TTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAA--TTTCTCTTTT 16456 ||| ||| | ||| || ||||| || || ||||| || ||||||| || Sbjct 24960 TTTCTTTTAACACATGGCAAAGTTTCAATTGCATTAAATAACTTTTCTCTGTT 24908 Score = 104 bits (114), Expect = 2e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 16033 TCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCG 16092 |||||||||||||||||| |||||| | | ||| | | ||||| ||||| |||||| Sbjct 25407 TCTATCTGCTACAAATTCAATATATCGTCTCATAAGATTACAATTCATTCCAATAAGTGC 25348 Query 16093 TACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149 || |||||||||| ||||| ||||| ||||||||| || || || ||||| || || Sbjct 25347 AACAGGAAGAGCTTCTGTTAGAAATTCTTGTTCTATTACTACTGCATCTTTGATTAT 25291 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 || ||||| || ||||| ||||| ||||||||||| || || | || ||| |||| | Sbjct 19920 TTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAAAATGT 19861 Query 16652 TTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCT 16711 ||||| || | ||| | ||||| | |||||| || | ||| ||||||||| Sbjct 19860 TTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTTCTTCT 19801 Query 16712 GGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATG 16771 ||||| || ||| | || || |||||||||| ||| ||||| |||| || Sbjct 19800 ACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATTCAATA 19741 Query 16772 GGAAATACGACGTATCTATCTAAGGATTC-CT-TTAACACGGGTTCATC 16818 ||||| | ||| | | ||| |||||| || |||||| |||||||| Sbjct 19740 GGAAAGATGACAAAAC-GTCT-TGGATTCTCTCTTAACAAAGGTTCATC 19694 >seq81429 Length=7601 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 119014 CCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTTATCGTTTAAGTAGATA-CA 119072 || || || || || |||||| | || ||||| || || ||||| ||||| || || || Sbjct 650 CCTACATAACCATTTGGATCTCTACCATCTAATTCATATTTATCATTTAAATATATTGCA 591 Query 119073 GACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACAT 119132 | | | | || ||| ||| ||||| ||||||| || |||||||| ||||| ||||| Sbjct 590 AATGATAGA-GCTTCTTCTGGACTCTTAGTCCATTCAAGAATTTTTTTTGCCCAATACAT 532 Query 119133 ACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTG 119171 | ||| | || ||||||||||| || | | |||||| Sbjct 531 TCTTAAGAAACCATGCATTTTACCTTCTTGTACCATCTG 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510823665226560