Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq76348 152 6e-32 seq73121 141 1e-28 seq45383 131 2e-25 seq84422 125 8e-24 seq55348 102 1e-16 >seq76348 Length=48548 Score = 152 bits (168), Expect = 6e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24519 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 24578 ||||||||||| ||||| || ||||| || |||||||| || || |||||| |||||| Sbjct 19923 AAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAAAA 19864 Query 24579 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 24638 | |||||| ||| | || | ||||| | ||||||||||| | ||| |||||| Sbjct 19863 TGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTTCT 19804 Query 24639 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 24698 || |||||||| ||||| || || || || |||||||| | |||||| || |||||| | Sbjct 19803 TCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATTCA 19744 Query 24699 ATTGGAAAAATAACAAATCTATTTGGATT 24727 || ||||| || ||||| | ||||||| Sbjct 19743 ATAGGAAAGATGACAAAACGTCTTGGATT 19715 Score = 105 bits (116), Expect = 8e-18 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 23927 AACATTATAGATTCTTT--TAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCC 23984 ||||||||| | | || | |||| |||||| | | ||||||||| ||||| || Sbjct 25448 AACATTATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCA 25389 Query 23985 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA 24044 |||||| | |||| | | |||||||||||| |||||| ||| |||||||| | || Sbjct 25388 ATATATCGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTT 25329 Query 24045 AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTC 24104 |||||||||||||| || || || ||| | || || | | | | | |||| Sbjct 25328 AGAAATTCTTGTTCTATTACTACTGCATCTTTGATTATTTGTATAATTCTCTCTTTGGAG 25269 Query 24105 GGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 24159 ||| || | ||||| | ||||| |||||||| ||||| || || ||||||| Sbjct 25268 GGTTTATTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACCCT 25214 Score = 93.3 bits (102), Expect = 5e-14 Identities = 108/146 (74%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 23788 TTTAAAAGTCAACATCTAAAGAAAAA---TGATTGTCTTCTTGAGACATAACTCCCATTT 23844 ||||||| || |||| || | |||| |||| |||| || | ||| ||||| || Sbjct 39504 TTTAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATT 39445 Query 23845 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 23904 | || ||||| || || | |||||||||||| || ||||| ||||| | ||||||| || Sbjct 39444 TCTGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTT 39385 Query 23905 CCATGAAATCGGATGGATTNNNAACA 23930 |||| ||||| ||||||| |||| Sbjct 39384 CCATAAAATCAAATGGATTTTCAACA 39359 Score = 89.7 bits (98), Expect = 6e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 24367 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 24426 ||||||||| | | | |||||| | |||| || ||| |||||||| || ||||||| Sbjct 21768 CATTAAAGAAAAATTACCTTTCATCAGGATCTGAAATATAAGTATCAATTAACAGACTAT 21709 Query 24427 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 24486 ||||||| ||||||| ||||| || | ||||| ||||| || || || | || || | Sbjct 21708 ACATTTCTGAATGAACATTTTCTATTGAAATTTGGAATCCATAAAAGCAGCGTGCTTCAG 21649 Query 24487 TAATCTGTACTTCT 24500 ||| || |||||| Sbjct 21648 TAACTTGAACTTCT 21635 >seq73121 Length=35095 Score = 141 bits (156), Expect = 1e-28 Identities = 684/1063 (64%), Gaps = 45/1063 (4%) Strand=Plus/Plus Query 147331 ATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCATTTAAA 147390 |||||||| ||| || ||| | || ||| | ||| ||| | | | || |||||| Sbjct 21105 ATGACTCCTATTCGACCAATGCTTGCTGAACCTTGTCGATCTATAGAATATGCTTTTAAA 21164 Query 147391 AAATTTCCATCAGGAATGTTTGCTGAAGTCAAATACGATGGCGAGAGAGTACAAGTTCAT 147450 |||| |||| || |||| ||||||| | ||||| ||||| ||| | || ||||||||| Sbjct 21165 AAATGTCCAAATGGTATGTATGCTGAAATTAAATATGATGGAGAGCGTGTTCAAGTTCAT 21224 Query 147451 AAAAATAATAACGAGTTTGCCTTTTTTAGTAGAAACATGAAACCAGTACTCTCTTATAAA 147510 || || | | | ||| | | ||||||| ||| | |||||||||| ||||| Sbjct 21225 AAGAAAGGTGATAAATTTACATATTTTAGTCGAAGTTTAAAACCAGTACAACAACATAAA 21284 Query 147511 GTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTATCGTATTG 147570 | || | ||||| | ||| | ||||| ||| | ||| | | | | | Sbjct 21285 ATATCACATTTTAAAGACCATATAGCTAAAGCTTTTCATCAAGGAAAAGATTTAATTCTT 21344 Query 147571 GATTCTGAAATTGTTCTTGTAGA--CGAACATA-ATGTACAGCTCCCGTTTGGAAGTTTA 147627 |||| ||| ||| |||| |||| | || | | | || | || ||||||| |||| Sbjct 21345 GATTGTGAGATTCTTCTATTAGATACAAAAACAGACAAACCTTTACCTTTTGGAACTTTA 21404 Query 147628 GGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTTGTGTTTGACTGT 147687 ||| | || |||||| | | |||| | ||| | ||||||||||| ||||||||| Sbjct 21405 GGTGTTCATAAAAAGGCTGCTTTTAAAGATGCTACTGTTTGTTTGTTTGTATTTGACTGT 21464 Query 147688 TTGTACTTTGATGGATTCGATATGACGGACATTCCATTGTACAAACGAAGATCTTTTCTC 147747 | || | | |||| ||| | | |||| | | | | || |||| |||| Sbjct 21465 ATATATTATAATGGTAAAGATCTAATGGACTGTACTCTCAAAGAAAGAAGGAAAATTCTT 21524 Query 147748 AAAGATGTTATGGTCGAGATACCCAATAGAATAGTA----TTCTCAGAG----TTGACGA 147799 |||| |||| | ||| || | ||| || |||| | | || | | Sbjct 21525 CAAGAAAATATG--CAAGAAGTTAAAGATCATATTAAATTTTCTGAAATGAAATTAATCA 21582 Query 147800 ATATTAGTAACGAGTCTCAGTTAACTGACGTATTGGATGA-TGCACTAACAAGAAAATTA 147858 | | ||| || || | | ||| || ||| ||| || | || |||| | | ||| Sbjct 21583 AAAATAGAAAAGAAT-TAAGTGAAATGATAAATTT--TGCCTTCA--AACAGGGA--TTA 21635 Query 147859 GAAGGATTGGTCTTAAAAGATATTAATGGAGTA--TACGAGCCGGGAAAAAGAAGATGGT 147916 ||||| | || || |||||| || |||| ||| | || || ||| | ||| Sbjct 21636 GAAGGTCTTGTTTTGAAAGATCC--ATCAAGTACTTACAAACCAGGGAAACGTCATTGGC 21693 Query 147917 TAAAAATAAAGCGAGACTATTTGAACGAGGGTTCCATGGCAGATTCTGCCGATTTAGTAG 147976 | || | || ||| ||| | | || ||| ||||| ||| ||| || ||||| | Sbjct 21694 TTAAGGTGAAAAAAGATTATCTCCATGAAGGTAGTATGGCCGATAGTGCTGACTTAGTTG 21753 Query 147977 TACTAGGTGCTTACTATGGTAAAGG-AGCAAAGGGTGGTATTATGGCAGTCTTTCTAATG 148035 | ||||||| || | ||||| || |||||||| || || ||| | | ||| | ||| Sbjct 21754 TTTTAGGTGCATATTTTGGTACTGGTAGCAAAGGAGGG-ATGATGTCTATTTTTTTGATG 21812 Query 148036 GGTTGTTACGATGATGAATCCGGTAAATGGAAGACGGTAACTAAATGTTCA----GGACA 148091 || |||| ||| | ||| |||||| || || |||||| || || ||||| Sbjct 21813 GGATGTTTTGATAAGAGGTCCCAGAAATGGTGTACTGTTACTAAA-GTACATGGAGGACA 21871 Query 148092 TGATGATAATACGTTAAGGGTTTTGCAAGACCAATTAACGATGGTTAAAATTAACAAGGA 148151 | |||| ||| || ||| ||||| ||||||||| | || || || Sbjct 21872 TACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTTAAAGTCAATAATGA 21931 Query 148152 TCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTATA-TTCCCGATTTTG-TA 148209 | | ||||| || |||||| ||||| ||| ||| || |||||||||||| | Sbjct 21932 A---ATGGATATTCCTGAATGGTTGAATGTTAA-AAAGTCTTTAATTCCCGATTTTGTTT 21987 Query 148210 GTAGAGGATCCGAAACAATCTCAAATATGGGAAATTTCAGGAGCAGAGTT---TACATCT 148266 ||| | ||||| ||| ||||||| | |||||||| |||| ||||| || || | || Sbjct 21988 GTA-AAGATCCAAAAACATCTCAAGTTTGGGAAATAACAGGTGCAGAATTTTCTAAAGCT 22046 Query 148267 TCCAAGTCACATACAGCGAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATTAGA 148326 ||| | ||||| || ||||||||||| || ||||||||| | |||| ||| | Sbjct 22047 --GAAG-CTCATACTGCAAATGGAATATCAATAAGATTTCCTCGTGTTACATTAATTCGT 22103 Query 148327 GAAGATAAAACGTGGAAAGAATCTACTCATCTAAACGATTTAG 148369 | |||||| | ||||||||| | ||| | || | || |||| Sbjct 22104 TATGATAAATCATGGAAAGAAGCAACTACTTTAGAAGAATTAG 22146 >seq45383 Length=59856 Score = 131 bits (144), Expect = 2e-25 Identities = 113/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 54422 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 54481 |||||| | |||||||| | ||||| ||||| || ||||||||||||||||| | || Sbjct 46157 CTAGTTGCAGCATTAAAAAGAGTAGGTGAAGCATGTGTAAACCATTTTTCAGATAATAAT 46098 Query 54482 TTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 54541 || |||||||| || || || || ||||| || ||| ||||||| || ||||||||| Sbjct 46097 TTATACGTCTCAATTGCAGAATCAATATCTTCTTTATGTATTCCTATGGCTACACGCATT 46038 Query 54542 AACATGTGCTGAGGTCTTTC 54561 ||||| |||||||||||||| Sbjct 46037 AACATATGCTGAGGTCTTTC 46018 Score = 105 bits (116), Expect = 8e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 53984 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 54043 |||||||||| ||||||||||| |||||| | ||| | | |||| | |||||| Sbjct 54657 GGACATTCATGAGGACACATCAATGACCACATATCATCAGCTTCAACTCTCTGCATAAAT 54598 Query 54044 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 54103 | ||| ||||||||||| || ||||| ||| | || | ||| || ||||| ||| Sbjct 54597 AAATCGGGAATCCAAAGTGCATAAAATAAATCACGGGCACGGCATTCTTCTTTTCCAGTA 54538 Query 54104 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 54159 || ||||| | |||||| || | | ||| || | |||||| |||||||| ||||| Sbjct 54537 TTTTTTTTTAAATCGAGAAATTCGAAAATGTCTGCATGCCAAGGTTCCAAATATAT 54482 >seq84422 Length=160705 Score = 125 bits (138), Expect = 8e-24 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 52876 CCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 52935 |||||| || |||||||||||||||||||| ||| | || || || ||||| ||||| Sbjct 8654 CCATCCATAGAAATGCATACTTGTTAGTTTTCCATAGTTTGGTTCAGCAATATGAATATT 8713 Query 52936 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 52995 | || || |||||||| ||||| ||||| || ||||||||||||||||| || | || Sbjct 8714 TAACGACTGGCTTTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTTATAATGGATTT 8773 Query 52996 TTGTGGAATTTCCCAAATAGTT 53017 ||| | |||||||||| |||| Sbjct 8774 TTGAGATATTTCCCAAACAGTT 8795 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 53149 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 53208 ||| |||||||||||||| || ||||| | ||||||||||| ||||| || || | Sbjct 9112 TACCTGAAATTCTCCAGATAAAACTCTTCTCACATAAATATTACTTGTATAAGGCTCTAT 9171 Query 53209 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 53268 || |||||||| || | |||||| ||||| || ||||| ||||| || | | | || Sbjct 9172 TGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTTGGCATTGGAGAAATAAGCAA 9231 Query 53269 ACTATTTCTAAGACCGTAT 53287 ||||||||| | ||| ||| Sbjct 9232 ACTATTTCTTATACCATAT 9250 >seq55348 Length=21870 Score = 102 bits (112), Expect = 1e-16 Identities = 127/172 (74%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 53390 TATGTATCGTATGGTCCT--TCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 53447 || || || |||||||| | ||| | |||| ||||||||| || ||||||||||| | Sbjct 9522 TAAGTTTCATATGGTCCAAATTCTTGT--GCTAATTCACAACTTGCTTCTAATGCACCAT 9465 Query 53448 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 53507 ||||||| ||||| || || | | |||| | |||||||| |||||||| |||| Sbjct 9464 AATAAATAGTTTCAAAAATTTCAATGTTTAATTTCTGTGCTTCTTCACTATCAAAAGGAT 9405 Query 53508 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 53559 | | || |||||| | ||||||||||||||||||| || || || || Sbjct 9404 ACCTCAAAGAAATAAATGTATCTGCTAATCCTTGAACACTTATTCCTATCGG 9353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593035792179840