Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq73005 123 2e-23 seq76947 114 1e-20 seq81434 113 4e-20 seq47705 104 2e-17 >seq73005 Length=127446 Score = 123 bits (136), Expect = 2e-23 Identities = 175/246 (71%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || | |||||||| |||| ||| | || || |||||||||||||| || || | Sbjct 43030 TTCCTCCCCTGAGCCTGAGAACCAGATGAAGGGTAGATTCCTTTTGAATGTTGTAATCAG 42971 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||||||| || | || |||||||| || || ||| ||||||| | |||||| || | Sbjct 42970 ACAGGGTTCGGCCATCTTCCAGCTGCTTTCCGGCAAAAATAAGACGCTGCTGATCTGGAG 42911 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||| || ||||| ||||| | | | || |||| || || Sbjct 42910 GGATCCCTTCCTTATCCTGAATCTTGGTCTTCACATTCTCAATTGTGTCACTAGGTTCTA 42851 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAATCTCT 21186 || | |||||| || || || ||||| ||||| |||||||| ||||| ||| || | Sbjct 42850 CCTCAAGGGTAATTGTTTTACCAGTTAATGTTTTCACAAATATCTGCATGATGATTCACC 42791 Query 21187 TATAAA 21192 |||||| Sbjct 42790 TATAAA 42785 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| || || || || | ||| | || || |||||||||||||| || || | Sbjct 43258 TTCCACCTCTCAATCTAAGAACGAGATGAAGGGTTGATTCCTTTTGAATGTTGTAATCAG 43199 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||||||| | | || |||| || ||||| ||| | ||||| | ||||||||| | Sbjct 43198 ACAGGGTTCTGCCATCTTCCAATTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAG 43139 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||| || ||| || |||||| | | | ||||||| ||| ||| Sbjct 43138 GTATTCCTTCCTTATCCTGGATTTTAGCTTTCACATTTTCTATGGTATCACTGGGTTCCA 43079 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||||| ||||||||| || || || | || ||||||||||| |||||| Sbjct 43078 CTTCCAAGGTAATGGTTTTACCAGTAAGTGTCTTGACAAATATCTGCATT 43029 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || ||||||||||| |||| || | ||| |||||||||||||| ||||| | Sbjct 43486 TTCCACCACGCAGCCTGAGAACCAAGTGAAGGGTGCTTTCCTTTTGAATGTTGTAGTCAG 43427 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | || || | || |||| ||| ||||| ||| | || || | |||||| || | Sbjct 43426 ATAATGTGCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGACGCTGCTGATCTGGAG 43367 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||| ||||| ||||||| || || | | | ||||||| ||||| Sbjct 43366 GAATTCCTTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATGGTATCACTTGGCTCTA 43307 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||||| |||||||||||||| || || ||||| ||||| || |||||| Sbjct 43306 CTTCCAGAGTAATGGTCTTGCCTGTCAAAGTTTTAACAAAAATCTGCATT 43257 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005 ||||| |||| || | || |||| || || || |||||||| |||||||||||||| Sbjct 44855 TTTCCACCTCTGAGACGAAGAACCAAGTGTAATGTAGACTCCTTCTGAATGTTATAGTCA 44796 Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065 | || || | |||| ||||| || || || ||| ||||||| |||||||| || Sbjct 44795 GAAAGAGTACGACCGTCTTCCAGTTGCTTCCCTGCAAAAATAAGCCTCTGCTGATCGGGA 44736 Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 || | |||||| || || || ||| |||||| | | | ||||||| ||||| Sbjct 44735 GGAATGCCTTCTTTATCTTGAATTTTTGCTTTCACATTTTCTATTGTATCACTTGGCTCT 44676 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || || |||||||| || | || || ||||| || ||||| Sbjct 44675 ACTTCCAGTGTTATTGTCTTGCCAGTCAGGGTCTTCACAAAAATCTGCAT 44626 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| || || || | |||||| ||||| || || |||||||||||||| | | Sbjct 44168 CCACCACGCAGTCTAAGAACAAGATGCAAGGTGGATTCTTTCTGAATGTTATAGTCTGAC 44109 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | || |||| |||||| || ||| |||| | |||||||| || || Sbjct 44108 AAGGTGCGTCCATCTTCCAACTGTTTTCCTGCAAAAATTAACCTCTGCTGATCTGGTGGA 44049 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| || || ||| || | | | || || | ||||| | Sbjct 44048 ATACCTTCCTTGTCCTGAATTTTGGCTTTTACGTTTTCTATGGTGTCGCTCGGCTCTACT 43989 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || || ||||| || ||||| Sbjct 43988 TCTAATGTGATGGTCTTGCCAGTCAGTGTCTTAACAAAAATCTGCAT 43942 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || |||| || || || | ||| | || ||||| ||||| || || ||||| | | Sbjct 43940 CCACCACGCAATCTAAGGACAAGATGGAGTGTTGACTCTTTTTGGATATTGTAGTCAGAC 43881 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | || |||| ||| ||||| ||| | || | || ||||| || || Sbjct 43880 AAGGTGCGACCATCTTCCAACTGCTTGCCAGCAAAGATCAATCGTTGCTGATCTGGAGGT 43821 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||| || ||||| | | | ||| |||| ||| || | Sbjct 43820 ATTCCTTCTTTGTCTTGGATTTTAGCCTTCACATTCTCAATAGTGTCACTGGGTTCTACT 43761 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||| || |||||||| || | ||||||||||| ||||||||| Sbjct 43760 TCCAGGGTGATAGTCTTGCCTGTCAGTGTTTTGACAAAGATTTGCATT 43713 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || |||| ||||| || | ||| | || ||||| ||||| ||||| ||||| | Sbjct 43714 TTCCACCACGCAATCTGAGAACAAGATGGAGTGTTGACTCTTTTTGGATGTTGTAGTCAG 43655 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || ||| | | || |||| ||| || || ||| | || | | ||| ||||| | Sbjct 43654 ACAAGGTGCGACCATCTTCCAACTGCTTCCCAGCAAAGATCAAACGCTGTTGGTCAGGAG 43595 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||| ||||| ||| ||| ||| || | | | ||||||| ||| || Sbjct 43594 GAATGCCTTCTTTGTCTTGGATTTTTGCTTTGACATTTTCTATTGTATCACTGGGTTCAA 43535 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | || || || || || || | || ||||||||||| |||||| Sbjct 43534 CTTCTAAAGTTATTGTTTTACCAGTGAGTGTCTTGACAAATATCTGCATT 43485 >seq76947 Length=48948 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || || ||||||| ||| | ||| ||||||||||| ||||| ||||| | Sbjct 23493 CCACCTCGAAGTCTCAGCACCAAATGAAGAGTAGACTCCTTTTGTATGTTGTAGTCTGAG 23552 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || |||||||| || || ||| |||| | | |||||| || || Sbjct 23553 AGTGTACGACCATCTTCCAGCTGCTTTCCTGCAAAAATCAAACGCTGCTGATCTGGAGGA 23612 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || ||||||| ||||| | | | |||||||| |||||| | Sbjct 23613 ATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCACTGGGCTCTACT 23672 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| || ||||| || || || | || || ||||| || |||||| Sbjct 23673 TCCAAAGTGATGGTTTTTCCAGTGAGTGTCTTCACAAAGATCTGCATT 23720 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||| | ||| || ||||| ||||| |||||||||| || || || | ||| Sbjct 22596 AGAACTAAATGTAGAGTAGATTCCTTCTGAATATTATAGTCCGAGAGAGTGCGGCCATCC 22655 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || | ||||| || ||| |||| |||||||| || || || | ||||| || || Sbjct 22656 TCTAATTGTTTACCTGCAAAAATCAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTATCC 22715 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 || ||| ||| || | | | |||||||| || || ||||| |||||||| Sbjct 22716 TGAATTTTTGCTTTGACATTTTCAATAGTATCACTTGGTTCTACTTCCAAAGTAATGGTT 22775 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || |||||||| ||||| |||||||||||||| Sbjct 22776 TTCCCGGTTAATGTTTTTACAAATATTTGCAT 22807 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || |||| ||||||||||| || | ||| || || || |||||||| ||||| | Sbjct 23037 CCACCACGCAACCTGAGCACCAAGTGGAGAGTTGATTCTTTCTGAATGTTGTAGTCGGAG 23096 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||| ||||| ||||| || ||| | || | | |||||| || || Sbjct 23097 AGGGTACGACCGTCTTCCAGTTGTTTTCCGGCAAAGATCAAGCGCTGCTGATCGGGAGGT 23156 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| || || |||||| ||| || | | | || |||| || || | Sbjct 23157 ATGCCTTCTTTATCTTGTATCTTTGCTTTTACGTTTTCTATGGTGTCACTAGGTTCAACT 23216 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| || || ||||| || || | ||||| ||||| || |||||| Sbjct 23217 TCCAGAGTTATAGTCTTCCCTGTGAGAGTTTTTACAAAAATCTGCATT 23264 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||| | |||||| || || || || ||||| || | || || | | || || || || Sbjct 22832 ATGGAGAGTGGATTCTTTCTGGATATTATAATCTGAAAGAGTGCGACCATCTTCAAGTTG 22891 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 ||| || ||| | || | ||||||||| || || | |||||| || || |||||| Sbjct 22892 TTTTCCAGCAAATATCAATCTCTGCTGATCGGGTGGAATGCCTTCTTTATCTTGGATCTT 22951 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 | ||||| | | | |||||||| || || ||||| |||||||| || || || Sbjct 22952 TGCCTTCACATTCTCTATAGTATCACTCGGTTCTACTTCCAAAGTAATGGTTTTTCCTGT 23011 Query 21152 TAACGTTTTGACAAATATTTGCAT 21175 | ||||| |||||||||||||| Sbjct 23012 GAGTGTTTTAACAAATATTTGCAT 23035 >seq81434 Length=18142 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005 ||||| |||| || | || |||| || || || |||||||| |||||||||||||| Sbjct 9287 TTTCCTCCTCTGAGACGAAGAACCAAGTGTAATGTAGACTCCTTCTGAATGTTATAGTCA 9228 Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065 | || || | |||| ||||| || || || ||| ||||||| |||||||| || Sbjct 9227 GAAAGAGTACGACCGTCTTCCAGTTGCTTCCCTGCAAAAATAAGCCTCTGCTGATCGGGA 9168 Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 || | |||||| || || || |||| |||||| | | | ||||||| ||||| Sbjct 9167 GGAATGCCTTCTTTATCTTGAATTTTTTCTTTCACATTTTCTATTGTATCACTTGGCTCT 9108 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || || |||||||| || | || || ||||| || ||||| Sbjct 9107 ACTTCCAGTGTTATTGTCTTGCCAGTCAGGGTCTTCACAAAAATCTGCAT 9058 >seq47705 Length=377 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| || || || |||||||| |||||||||||||| | || || | |||| Sbjct 365 AGAACCAAGTGTAATGTAGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGACCGTCT 306 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 ||||| || || || ||| ||||||| |||||||| || || | |||||| || || Sbjct 305 TCCAGTTGCTTCCCTGCAAAAATAAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTATCT 246 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 || ||| |||||| | | | ||||||| ||||| ||||| || || ||| Sbjct 245 TGAATTTTTGCTTTCACATTTTCTATTGTATCACTTGGCTCTACTTCCAGTGTTATTGTC 186 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | || || ||||| || ||||| Sbjct 185 TTGCCAGTCAGGGTCTTCACAAAAATCTGCAT 154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421783642188128