Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq85547 113 4e-20 seq73005 107 2e-18 seq76947 105 5e-18 >seq85547 Length=49496 Score = 113 bits (124), Expect = 4e-20 Identities = 115/149 (77%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 25113 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 25172 ||||||||| || |||||||||||| | || ||||||||| ||| | || ||||| Sbjct 24292 AAGCAAAAA-TTCAAGATAAAGAAGGTATACCACCAGATCAACAGAGATTGATTTTTGCT 24350 Query 25173 GGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACT 25232 || ||||||||||||||| ||| || | ||||| || |||||||||||||| || Sbjct 24351 GGGAAACAATTGGAAGATGGGCGTACTTTGTCTGATTATAACATTCAAAAGGAATCAACA 24410 Query 25233 CTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||| ||||| | || || ||||||| Sbjct 24411 CTTCACTTGGTGCTTCGTTTGAGAGGAGG 24439 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| || || | |||||||| || || || ||||| ||| ||| ||| || Sbjct 24440 AATGCAGATTTTTGTTAAAACATTAACAGGGAAGACCATCACCTTGGAAGTGGAGCCAAG 24499 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | || |||||| ||||||||||| | || ||||| Sbjct 24500 TGACACCATTGAGAATGTAAAAGCTAAAATTCAAGATAAAGAAGGAATTCCTCCCGATCA 24559 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| | | |||||||| |||||||| || |||||| || | | ||||| || Sbjct 24560 ACAGCGTTTGATCTTTGCAGGCAAACAGTTAGAAGATGGACGCACCTTATCAGATTATAA 24619 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||||||||||||| || |||||| |||| | || ||| ||||||| Sbjct 24620 TATTCAAAAGGAATCGACACTTCACTTGGTACTTCGTTTAAGAGGAGG 24667 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | |||||||| || || ||||| ||||| ||| ||||||| Sbjct 24668 AATGCAAATTTTTGTTAAAACATTAACAGGGAAAACAATTACTCTGGAAGTGGAACCCAG 24727 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | || ||||| ||||| ||||| | || ||||| Sbjct 24728 TGATACCATTGAAAATGTGAAAGCTAAAATCCAAGATAAGGAAGGCATTCCACCTGATCA 24787 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| ||||| |||||||| ||||||||| |||||||| ||| | | ||||| || Sbjct 24788 ACAGAGACTCATCTTTGCTGGCAAACAACTGGAAGATGGTCGTACTCTTTCGGATTATAA 24847 Query 25214 TATTCAAAAGGA 25225 ||||||||| || Sbjct 24848 TATTCAAAAAGA 24859 >seq73005 Length=127446 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| ||||| |||| ||| | || || |||||||||||| ||| ||||||| Sbjct 43029 AATGCAGATATTTGTCAAGACACTTACTGGTAAAACCATTACCTTGGAAGTGGAACCCAG 43088 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | || ||||| ||||| ||||| | || || || Sbjct 43089 TGATACCATAGAAAATGTGAAAGCTAAAATCCAGGATAAGGAAGGAATACCTCCTGACCA 43148 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 || | ||||||||||| ||||| |||||||||||| || ||| || | |||||||| Sbjct 43149 GCAGCGTCTTATCTTTGCTGGCAAGCAATTGGAAGATGGCAGAACCCTGTCTGATTACAA 43208 Query 25214 TATTCAAAAGGAATCTACTCTTCA 25237 |||||||||||||| || ||||| Sbjct 43209 CATTCAAAAGGAATCAACCCTTCA 43232 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| ||||| | |||||||| || || ||||| |||||| || ||||| Sbjct 42802 ATGCAGATATTTGTGAAAACATTAACTGGTAAAACAATTACCCTTGAGGTAGAACCTAGT 42861 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| || ||| ||||| ||||| | || |||||| Sbjct 42862 GACACAATTGAGAATGTGAAGACCAAGATTCAGGATAAGGAAGGGATCCCTCCAGATCAG 42921 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | ||||| ||||| || || || |||||||| | ||| || | |||||||| Sbjct 42922 CAGCGTCTTATTTTTGCCGGAAAGCAGCTGGAAGATGGCCGAACCCTGTCTGATTACAAC 42981 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 ||||||||||||||||| ||||| |||| Sbjct 42982 ATTCAAAAGGAATCTACCCTTCATCTGGT 43010 >seq76947 Length=48948 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||||||||| | |||||||| || || ||||||||||| ||| ||||| Sbjct 22807 ATGCAAATATTTGTAAAAACATTAACCGGGAAAACCATTACTTTGGAAGTAGAACCAAGT 22748 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || |||| ||||||| ||||||||||| | || |||||| Sbjct 22747 GATACTATTGAAAATGTCAAAGCAAAAATTCAGGATAAAGAAGGAATTCCTCCCGATCAA 22688 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || ||||| || ||||| || |||||||| || ||| | ||| | | || || ||| Sbjct 22687 CAGAGACTGATTTTTGCAGGTAAACAATTAGAGGATGGCCGCACTCTCTCGGACTATAAT 22628 Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237 ||||| |||||||||||||| || Sbjct 22627 ATTCAGAAGGAATCTACTCTACA 22605 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | || ||| | || || ||||| || || ||| |||||| Sbjct 23491 ATGCAAATCTTTGTGAAGACACTCACTGGTAAAACAATCACTCTGGAAGTGGAACCAAGT 23432 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| ||||||| || |||||||| | || |||||| Sbjct 23431 GACACAATTGAAAATGTAAAGGCAAAAATTCAAGACAAAGAAGGAATTCCACCTGATCAA 23372 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || ||||||||||||| || || ||| |||||||| ||| || | ||||| ||| Sbjct 23371 CAGCGACTTATCTTTGCTGGTAAGCAACTGGAAGATGGTCGCACTCTGTCAGATTATAAT 23312 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 |||||||||||||| || ||||| |||| Sbjct 23311 ATTCAAAAGGAATCAACACTTCATCTGGT 23283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410334151400912