Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq76947 113 3e-20 seq73005 109 4e-19 >seq76947 Length=48948 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || |||||||||| || | |||| || || |||||||||||||| || Sbjct 23493 CCACCTCGAAGTCTCAGCACCAAATGAAGAGTAGACTCCTTTTGTATGTTGTAGTCTGAG 23552 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||| ||||| ||||| | |||||||| || || Sbjct 23553 AGTGTACGACCATCTTCCAGCTGCTTTCCTGCAAAAATCAAACGCTGCTGATCTGGAGGA 23612 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||| || |||||| ||| | || | || | ||| | | || || Sbjct 23613 ATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCACTGGGCTCTACT 23672 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||||||||| || ||||| || ||||||||||||||||| Sbjct 23673 TCCAAAGTGATGGTTTTTCCAGTGAGTGTCTTCACAAAGATCTGCAT 23719 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || |||| ||| ||||||| ||| | ||| ||||||||| |||||||||||||| Sbjct 23037 CCACCACGCAACCTGAGCACCAAGTGGAGAGTTGATTCTTTCTGAATGTTGTAGTCGGAG 23096 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| || || || || || || | |||||||| ||| || Sbjct 23097 AGGGTACGACCGTCTTCCAGTTGTTTTCCGGCAAAGATCAAGCGCTGCTGATCGGGAGGT 23156 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || || || || ||||||| |||| | |||| | || | | ||| || Sbjct 23157 ATGCCTTCTTTATCTTGTATCTTTGCTTTTACGTTTTCTATGGTGTCACTAGGTTCAACT 23216 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || || || || || ||||||||||| ||||| |||||||| Sbjct 23217 TCCAGAGTTATAGTCTTCCCTGTGAGAGTTTTTACAAAAATCTGCAT 23263 >seq73005 Length=127446 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || |||||||| || |||| ||| | || ||||| || || ||||||||||| || Sbjct 43485 TCCACCACGCAGCCTGAGAACCAAGTGAAGGGTGCTTTCCTTTTGAATGTTGTAGTCAGA 43426 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 | ||| | || |||||||||||||| || || || || |||||||| || || Sbjct 43425 TAATGTGCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGACGCTGCTGATCTGGAGG 43366 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | || ||||| |||||| ||||| || | || | ||| | | || || Sbjct 43365 AATTCCTTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATGGTATCACTTGGCTCTAC 43306 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || ||||| ||||| || | |||||| ||||| |||||||| Sbjct 43305 TTCCAGAGTAATGGTCTTGCCTGTCAAAGTTTTAACAAAAATCTGCAT 43258 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 ||||| || ||||| || | ||| ||| || || |||||||| || ||||| ||| Sbjct 43019 AGCCTGAGAACCAGATGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGACAGGGTTCGG 42960 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTC 34290 | || |||| |||||| || || ||||| || |||||||| || | ||| | || || Sbjct 42959 CCATCTTCCAGCTGCTTTCCGGCAAAAATAAGACGCTGCTGATCTGGAGGGATCCCT-TC 42901 Query 34291 CTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350 ||| || ||||| ||| | || | || | || | | ||| || || | || Sbjct 42900 CTTATCCTGAATCTTGGTCTTCACATTCTCAATTGTGTCACTAGGTTCTACCTCAAGGGT 42841 Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||| || || | ||||||||||| |||||||| Sbjct 42840 AATTGTTTTACCAGTTAATGTTTTCACAAATATCTGCAT 42802 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||| || ||||||||||| |||| | || || | || ||||||||||| || || || Sbjct 43676 TCTTTTTGGATGTTGTAGTCAGACAAGGTG-CGACCATCTTCCAACTGCTTCCCAGCAAA 43618 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 || | ||||| ||||| || | || || ||||| || ||||||||| | || Sbjct 43617 GATCAAACGCTGTTGGTCAGGAGGAATGCCTTCTTTGTCTTGGAT-TTTTGCTTTGACAT 43559 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 |||| | ||| | | ||| || || | || || ||||| || ||||| || || | Sbjct 43558 TTTCTATTGTATCACTGGGTTCAACTTCTAAAGTTATTGTTTTACCAGTGAGTGTCTTGA 43499 Query 34377 CAAAGATCTGCAT 34389 |||| |||||||| Sbjct 43498 CAAATATCTGCAT 43486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322708149044480