Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq76348 132 4e-26 >seq76348 Length=48548 Score = 132 bits (146), Expect = 4e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 || || ||||| ||||| || || ||||| | || ||||| ||||||| ||||| Sbjct 25140 TCATCTCTACTGATTAATTCATTGCTGAATGTTAATCCAGGCATCAGTCCTCTCTTTTTT 25081 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | ||| ||||| || ||||||||||||||||| ||||| |||||||| || |||||||| Sbjct 25080 AACCAGAATATTGCTGCAAATGAACCAGAAAAAAATATTCCTTCAACAGCAGCAAATGCT 25021 Query 16379 ACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagcccaatttgct 16438 || | || ||||| | || | || | | ||||| ||| | ||||||| ||| Sbjct 25020 ACAACACGTTCACCAAATGTGGAAGTTGAATCATTAATCCAATTTATTGCCCAATCAGCT 24961 Query 16439 ttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAA 16479 ||| ||||||||| || | || |||||||||||||| Sbjct 24960 TTTCTTTTAACACATGGCAAAGTTTCAATTGCATTAAATAA 24920 Score = 116 bits (128), Expect = 3e-21 Identities = 159/217 (73%), Gaps = 10/217 (5%) Strand=Plus/Minus Query 16040 TTATCGCATCCCAATTCCAACAATAA-TCTATCCGCCACAAATTCTATATACTGTTTCAT 16098 |||| |||||| ||||| ||| | || |||||| || |||||||| ||||| || |||| Sbjct 25433 TTATTGCATCCTAATTC-AACTAGAAGTCTATCTGCTACAAATTCAATATATCGTCTCAT 25375 Query 16099 TAAATCACAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttC 16158 | || ||| |||||||| || | | |||||| | |||||||||| ||| | || ||| Sbjct 25374 AAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTTAGAAATTCTTGTTC 25315 Query 16159 TATATTAACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTAAT-- 16216 ||| || || || ||||||| | | | | | | || ||| |||||||||| | Sbjct 25314 TATTACTACTGCATCTTTGATTATTTGTATAATT-CTCTCTTT---GGAGGGTTTATTTA 25259 Query 16217 --AAGTGTTTAAACATTATACAAGCAAAATCACAATG 16251 || || | ||||||| ||| |||||||||||||| Sbjct 25258 CCAAATGACTGAACATTAAACATGCAAAATCACAATG 25222 Score = 113 bits (124), Expect = 4e-20 Identities = 114/143 (80%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 15885 TTTAAAAATCAATATCTAGAG-AAAACACATTATCTTTTTTATTTGACATAACTG-ACAT 15942 |||||||||| ||| | | ||||||| | ||||| ||| |||| ||| ||| |||| Sbjct 39504 TTTAAAAATCTGCATCAAATGTAAAACAC-TGATCTTCTTTTTTTGCCATCACTCCACAT 39446 Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 || | ||||||| | |||||| ||||| || || |||||||||||||| | || |||| Sbjct 39445 TTCT-GATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATG 39387 Query 16003 TTCCATAAAATCAAAAGGATTTT 16025 ||||||||||||||| ||||||| Sbjct 39386 TTCCATAAAATCAAATGGATTTT 39364 Score = 96.9 bits (106), Expect = 3e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 16470 CATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTAT 16529 ||||||| ||| | | |||| | |||| ||||||||||||| |||| | ||||| Sbjct 21768 CATTAAAGAAAAATTACCTTTCATCAGGATCTGAAATATAAGTATCAATTAACAGACTAT 21709 Query 16530 ACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGG 16589 ||||||||||||||| ||| || |||| || || || ||||||||||| | ||||| | Sbjct 21708 ACATTTCTGAATGAACATTTTCTATTGAAATTTGGAATCCATAAAAGCAGCGTGCTTCAG 21649 Query 16590 ATATTTGTACTTC 16602 | ||| ||||| Sbjct 21648 TAACTTGAACTTC 21636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461977752388800