Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq81434 111 1e-19 seq73005 111 1e-19 seq76947 104 2e-17 seq47705 96.9 3e-15 >seq81434 Length=18142 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GT 45167 ||||||||| |||||||||||||| || || ||| || ||||||||||| ||||| | Sbjct 9057 GCCACCTCTTAATCTTAATACCAAATGAAGAGTGGATTCTTTCTGAATGTTATAGTCTGA 8998 Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | | | || | || |||| |||||||| || ||||| |||| ||| || || || | Sbjct 8997 TAAAGT-ACGTCCATCTTCCAACTGTTTTCCTGCAAATATTAACCTCTGCTGATCTGGTG 8939 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| ||||||||| |||||| || || | | |||| | ||| | Sbjct 8938 GAATACCTTCCTTGTCCTGAATTTTGGCTTTTACATTTTCTATTGTGTCACTTGGCTCTA 8879 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 | || | || || |||||||| ||||| ||||| ||||| || |||||| Sbjct 8878 CTTCTAATGTGATGGTCTTGCCAGTCAGTGTCTTAACAAAAATCTGCATG 8829 >seq73005 Length=127446 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GT 45167 ||||||||| |||||||||||||| || || ||| || ||||||||||| ||||| | Sbjct 44625 GCCACCTCTTAATCTTAATACCAAATGAAGAGTGGATTCTTTCTGAATGTTATAGTCTGA 44566 Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | | | || | || |||| |||||||| || ||||| |||| ||| || || || | Sbjct 44565 TAAAGT-ACGTCCATCTTCCAACTGTTTTCCTGCAAATATTAACCTCTGCTGATCTGGTG 44507 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| ||||||||| |||||| || || | | |||| | ||| | Sbjct 44506 GAATACCTTCCTTGTCCTGAATTTTGGCTTTTACATTTTCTATTGTGTCACTTGGCTCTA 44447 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 | || | || || |||||||| ||||| ||||| ||||| || |||||| Sbjct 44446 CTTCTAATGTGATGGTCTTGCCAGTCAGTGTCTTAACAAAAATCTGCATG 44397 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | || || | |||||||| || ||||| ||||| |||||||||||||| Sbjct 43484 CCACCACGCAGCCTGAGAACCAAGTGAAGGGTGCTTTCCTTTTGAATGTTGTAGTCAGAT 43425 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 | | ||| | || |||| || || || || ||||||| ||||| || || ||||| Sbjct 43424 AATGTGCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGACGCTGCTGATCTGGAGGA 43365 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || || |||||| || ||| ||| || | | | | || | ||| || Sbjct 43364 ATTCCTTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATGGTATCACTTGGCTCTACT 43305 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||||| |||||||| |||| ||| || ||||| || ||||| Sbjct 43304 TCCAGAGTAATGGTCTTGCCTGTCAAAGTTTTAACAAAAATCTGCAT 43258 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||||| | || ||| || | |||| |||| ||| || ||||||||||| ||||| Sbjct 44168 CCACCACGCAGTCT-AAGAACAAGATGCAAGGTGGATTCTTTCTGAATGTTATAGTCTGA 44110 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || |||| |||||||| || || || |||| ||| || || || || Sbjct 44109 CAAGGTGCGTCCATCTTCCAACTGTTTTCCTGCAAAAATTAACCTCTGCTGATCTGGTGG 44050 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||| ||||||||| |||||| || || | | | |||| | ||| || Sbjct 44049 AATACCTTCCTTGTCCTGAATTTTGGCTTTTACGTTTTCTATGGTGTCGCTCGGCTCTAC 43990 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || | || || |||||||| ||||| ||||| ||||| || |||||| Sbjct 43989 TTCTAATGTGATGGTCTTGCCAGTCAGTGTCTTAACAAAAATCTGCATG 43941 >seq76947 Length=48948 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| | ||| || | |||||||| || || || |||||||||||||||||| Sbjct 23037 CCACCACGCAACCTGAGCACCAAGTGGAGAGTTGATTCTTTCTGAATGTTGTAGTCGGAG 23096 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| |||| ||||||||||||||||| || ||||| ||||| || |||||||| Sbjct 23097 AGGGTACGACCGTCTTCCAGTTGTTTTCCGGCAAAGATCAAGCGCTGCTGATCGGGAGGT 23156 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || || || || || ||| || || | | | |||| | | || || Sbjct 23157 ATGCCTTCTTTATCTTGTATCTTTGCTTTTACGTTTTCTATGGTGTCACTAGGTTCAACT 23216 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || || ||||| || || ||||| || ||||| || ||||| Sbjct 23217 TCCAGAGTTATAGTCTTCCCTGTGAGAGTTTTTACAAAAATCTGCAT 23263 >seq47705 Length=377 Score = 96.9 bits (106), Expect = 3e-15 Identities = 110/145 (76%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GT 45167 ||||||||| |||||||||||||| || || ||| || ||||||||||| ||||| | Sbjct 153 GCCACCTCTTAATCTTAATACCAAATGAAGAGTGGATTCTTTCTGAATGTTATAGTCTGA 94 Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | | | || | || |||| |||||||| || ||||| |||| ||| || || || | Sbjct 93 TAAAGT-ACGTCCATCTTCCAACTGTTTTCCTGCAAATATTAACCTCTGCTGATCTGGTG 35 Query 45228 GCACACCCTCCTTGTCCGCAATTTT 45252 | | ||| ||||||||| |||||| Sbjct 34 GAATACCTTCCTTGTCCTGAATTTT 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394630257420568