Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq76348 165 8e-36 >seq76348 Length=48548 Score = 165 bits (182), Expect = 8e-36 Identities = 176/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 ||||||||||||| || | ||| || ||||||||||| ||||||| ||||| |||| Sbjct 25142 CCTCATCTCTACTGATTAATTCATTGCTGAATGTTAATCCAGGCATCAGTCCTCTCTTTT 25083 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 ||||||| |||||||| || ||||| || ||||| |||||||| ||||| |||||||| | Sbjct 25082 TTAACCAGAATATTGCTGCAAATGAACCAGAAAAAAATATTCCTTCAACAGCAGCAAATG 25023 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCATTTTCTAGCCCATTCA 14404 ||| | ||||| ||||| | || || || | ||||| ||| | ||||| ||| Sbjct 25022 CTACAACACGTTCACCAAATG-TGGAAGTTGAATCATTAATCCAATTTATTGCCCAATCA 24964 Query 14405 GAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC 14454 | |||| |||||| | | || |||||||| ||||||||||| | ||| Sbjct 24963 GCTTTTCTTTTAACACATGGCAAAGTTTCAATTGCATTAAATAACTTTTC 24914 Score = 136 bits (150), Expect = 4e-27 Identities = 153/202 (76%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 14589 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14648 ||||||||||||||||||||||||||||||| |||||||| || || | | | ||||| Sbjct 19925 CCAAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAA 19866 Query 14649 A--GTATTGC-TCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTA 14705 | || || | |||||||| || || ||||| | | ||| ||||||||||||| Sbjct 19865 AATGTTTTTCATCTTCATTC---AGACGTTCCCAATGAACCATATCTTTAGAAAGATCTA 19809 Query 14706 CTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTAT 14765 |||| || |||||||| || ||| ||||||| ||||||||| ||| || ||| || Sbjct 19808 CTTCTTCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGAT 19749 Query 14766 ATAATATAGGAAAAACTACAAA 14787 || |||||||| | ||||| Sbjct 19748 ATTCAATAGGAAAGATGACAAA 19727 Score = 123 bits (136), Expect = 2e-23 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATTTTT 13915 |||||||| |||| || | |||| | ||| ||||| || | || || || ||| Sbjct 39502 TAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATTTC 39443 Query 13916 TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13975 |||||||| | |||||||||||| || ||||| ||||| |||||||| ||||||| |||| Sbjct 39442 TGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTTCC 39383 Query 13976 ATAAAATCAAATGGATTT 13993 |||||||||||||||||| Sbjct 39382 ATAAAATCAAATGGATTT 39365 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 14000 ATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATAT 14059 ||| | || |||| || |||| ||| | ||| | |||||| || | || ||||||||| Sbjct 25442 ATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCAATATAT 25383 Query 14060 TGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAAT 14119 | ||| | || ||||||||| || || ||| ||||||| | |||| |||| Sbjct 25382 CGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTTAGAAAT 25323 Query 14120 TCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATT---TCATTAGAAGGA 14176 |||| |||||| || || || || || || | ||| ||||| || || || || Sbjct 25322 TCTTGTTCTATTACTACTGCATCTTTGATTAT--TTGTA-TAATTCTCTCTTTGGAGGGT 25266 Query 14177 GGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCT 14228 || | | ||| | || |||||||| |||||||||||||| || |||| Sbjct 25265 TTATTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACCCT 25214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481788442597440